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2021
Gamal AbdelNaser, A., W. S. Mohammed, M. ElHefnawi, M. Abdallah, A. Elsharkawy, and F. 'heyaM. Zahran, "The oral microbiome of treated and untreated chronic HCV infection: A preliminary study", Oral Diseases, 2021.
Zidan, M. N., N. Everitt, T. Ismail, and I. S. Fahim, "Organic Solar Cells Parameters Extraction and Characterization Techniques", Polymers, vol. 13, no. 19: Multidisciplinary Digital Publishing Institute, pp. 3224, 2021. Abstract
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Anwar, I., M. Said, M. Essam, K. Hosny, D. Mansour, N. Zayed, A. E. adway, M. Elamir, S. mogawr, M. Shazly, et al., "Outcome of Corona Virus Disease (COVID-19) in Egyptian Cohort of Long-Term Liver Transplant Recipients: Single Center Experience", Journal of Transplant Surgery, 2021. outcome_of_corona_virus_disease_covid-19_in_egypti.pdf
Bahaidarah, S., J. Al-Ata, N. Alkhushi, A. Azhar, Z. Zaher, B. Alnahdi, M. Abdelsalam, A. Elakaby, A. Dohain, and GaserAbdelmohsen, "Outcome of ductus arteriosus stenting including vertical tubular and convoluted tortuous ducts with emphasis on technical considerations.", The Egyptian heart journal : (EHJ) : official bulletin of the Egyptian Society of Cardiology, vol. 73, issue 1, pp. 83, 2021. Abstractoutcome_of_ductus_arteriosus_stenting.pdf

BACKGROUND: Ductal stenting is the preferred method of securing adequate pulmonary blood flow in patients with duct-dependent pulmonary circulation. The main limitation in most centers is the difficult vertical tubular or convoluted ducts that represent real challenges to interventional pediatric cardiologists. We present our experience in patent ductus arteriosus (PDA) stenting with some technical tips to overcome difficulties, especially in stenting tortuous or long tubular ducts. This study was conducted on all patients with cyanotic congenital heart disease who underwent PDA stenting between January 2011 and December 2018.

RESULTS: We attempted to stent the PDA in 43 patients, with a success rate of 93% (40 patients) and only one procedural mortality. There was also one stent migration that needed to be treated with urgent surgery. Three-fourths of the patients had difficult ductal morphology and origin. One stent was used to cover the PDA in 27 patients (62.8%), two stents were used in 13 (30.2%), and three stents were used in 2 patients (4.6%). In-stent stenosis rate was 12.5% (5 patients) and the development of progressive left pulmonary artery stenosis was seen in two patients (5%). Pulmonary artery growth was adequate in all patients.

CONCLUSIONS: PDA stenting is an effective method of palliation for patients with duct-dependent pulmonary circulation. It has low morbidity and mortality rates. Stenting difficult ducts have become more feasible with evolving materials and techniques.

Huang, L., H. A. Goda, M. Abdel-Hamid, J. A. Renye Jr, P. Yang, Z. Huang, Q. - K. Zeng, and L. Li, "Partial characterization of probiotic lactic acid bacteria isolated from Chinese dairy products", International Journal of Food Properties, vol. 24, no. 1, pp. 446-456, 2021. AbstractWebsite
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Huang, L., H. A. Goda, M. Abdel-Hamid, J. A. Renye Jr, P. Yang, Z. Huang, Q. Zeng, and L. Li, "Partial characterization of probiotic lactic acid bacteria isolated from Chinese dairy products.", International Journal of Food Properties, vol. 24, issue 1, pp. 446 - 456, 2021. partial_characterization_of_probiotic_lactic_acid_bacteria_isolated_from_chinese_dairy_products.pdf
Abdel-moein, K. A., and H. M. Zaher, "Parturient Cat As a Potential Reservoir for Coxiella burnetii: A Hidden Threat to Pet Owners", VECTOR-BORNE AND ZOONOTIC DISEASES, vol. 21, issue 4, pp. 264-268, 2021.
Biccard, B. M., P. D. Gopalan, M. Miller, W. L. Michell, D. Thomson, A. Ademuyiwa, E. Aniteye, G. Calligaro, M. S. Chaibou, H. T. Dhufera, et al., "Patient care and clinical outcomes for patients with COVID-19 infection admitted to African high-care or intensive care units (ACCCOS): a multicentre, prospective, observational cohort study", The Lancet, vol. 397, no. 10288, pp. 1885-1894, 2021. AbstractWebsite

Summary Background There have been insufficient data for African patients with COVID-19 who are critically ill. The African COVID-19 Critical Care Outcomes Study (ACCCOS) aimed to determine which resources, comorbidities, and critical care interventions are associated with mortality in this patient population. Methods The ACCCOS study was a multicentre, prospective, observational cohort study in adults (aged 18 years or older) with suspected or confirmed COVID-19 infection who were referred to intensive care or high-care units in 64 hospitals in ten African countries (ie, Egypt, Ethiopia, Ghana, Kenya, Libya, Malawi, Mozambique, Niger, Nigeria, and South Africa). The primary outcome was in-hospital mortality censored at 30 days. We studied the factors (ie, human and facility resources, patient comorbidities, and critical care interventions) that were associated with mortality in these adult patients. This study is registered on ClinicalTrials.gov, NCT04367207. Findings From May to December, 2020, 6779 patients were referred to critical care. Of these, 3752 (55·3%) patients were admitted and 3140 (83·7%) patients from 64 hospitals in ten countries participated (mean age 55·6 years; 1890 [60·6%] of 3118 participants were male). The hospitals had a median of two intensivists (IQR 1–4) and pulse oximetry was available to all patients in 49 (86%) of 57 sites. In-hospital mortality within 30 days of admission was 48·2% (95% CI 46·4–50·0; 1483 of 3077 patients). Factors that were independently associated with mortality were increasing age per year (odds ratio 1·03; 1·02–1·04); HIV/AIDS (1·91; 1·31–2·79); diabetes (1·25; 1·01–1·56); chronic liver disease (3·48; 1·48–8·18); chronic kidney disease (1·89; 1·28–2·78); delay in admission due to a shortage of resources (2·14; 1·42–3·22); quick sequential organ failure assessment score at admission (for one factor [1·44; 1·01–2·04], for two factors [2·0; 1·33–2·99], and for three factors [3·66, 2·12–6·33]); respiratory support (high flow oxygenation [2·72; 1·46–5·08]; continuous positive airway pressure [3·93; 2·13–7·26]; invasive mechanical ventilation [15·27; 8·51–27·37]); cardiorespiratory arrest within 24 h of admission (4·43; 2·25–8·73); and vasopressor requirements (3·67; 2·77–4·86). Steroid therapy was associated with survival (0·55; 0·37–0·81). There was no difference in outcome associated with female sex (0·86; 0·69–1·06). Interpretation Mortality in critically ill patients with COVID-19 is higher in African countries than reported from studies done in Asia, Europe, North America, and South America. Increased mortality was associated with insufficient critical care resources, as well as the comorbidities of HIV/AIDS, diabetes, chronic liver disease, and kidney disease, and severity of organ dysfunction at admission. Funding The ACCCOS was partially supported by a grant from the Critical Care Society of Southern Africa.

Badawi, G. A., M. M. Shokr, H. F. Zaki, and A. F. Mohamed, "Pentoxifylline prevents epileptic seizure via modulating HMGB1/RAGE/TLR4 signalling pathway and improves memory in pentylenetetrazol kindling rats", Clinical and Experimental Pharmacology and Physiology. , vol. 48, issue 8, pp. 1111–1124, 2021. pentoxyfilline_final.pdf
Badawi, G. A., M. M. Shokr, H. F. Zaki, and A. F. Mohamed, "Pentoxifylline prevents epileptic seizure via modulating HMGB1/RAGE/TLR4 signalling pathway and improves memory in pentylenetetrazol kindling rats.", Clinical and experimental pharmacology & physiology, vol. 48, issue 8, pp. 1111-1124, 2021. Abstract

Epilepsy is a chronic widely prevalent neurologic disorder, affecting brain functions with a broad spectrum of deleterious consequences. High mobility group box1 (HMGB1) is a nuclear non-histone protein that targets vital cell receptor of toll-like receptor 4 (TLR4) and advanced glycation end products (RAGE). HMGB1 mediated TLR4/RAGE cascade has been scored as a key culprit in neuroinflammatory signalling that critically evokes development of impaired cognition and epilepsy. The current study aimed to investigate the neuroprotective effect of pentoxifylline (PTX) on pentylenetetrazol (PTZ)-kindling rats by its anti-inflammatory/antioxidant capacity and its impact on memory and cognition were investigated, too. PTZ was intraperitoneally injected 35 mg/kg, every 48 h, for 14 doses, to evoke kindling model. Phenytoin (30 mg/kg, i.p.) and PTX (60 mg/kg, i.p.) or their combination were given once daily for 27 days. PTX treatment showed a statistically significant effect on behavioural, histopathological and neurochemical analysis. PTX protected the PTZ kindling rats from epileptic seizures and improved memory and cognitive impairment through the Morris water maze (MWM) test. Furthermore, PTX reversed PTZ hippocampal neuronal loss by decreasing protein expression of amyloid-β peptide (Aβ), Tau and β site-amyloid precursor protein cleavage enzyme 1 (BACE1), associated with a marked reduction in expression of inflammatory mediators such as HMGB1, TL4, and RAGE proteins. Furthermore, PTX inhibited hippocampal apoptotic caspase 1 protein, total reactive oxygen species (TROS) along with upregulated erythroid 2-related factor 2 (Nrf2) content. In conclusion, PTX or its combination with phenytoin represent a promising drug to inhibit the epilepsy progression via targeting the HMGB1/TLR4/RAGE signalling pathway.

Ziadé, N., S. Saad, M. A. Mashaleh, L. El Kibbi, B. E. Zorkany, H. Badsha, G. Harif, A. Daher, N. Salloum, N. Salloum, et al., "Perceptions of patients with rheumatoid arthritis about self assessment of disease activity after watching an educational video: a qualitative pilot study", Rheumatology International, vol. 41, issue 4, pp. 733 - 740, 2021.
Omar, A., E. M. Elshihy, M. Singer, D. Zarif, and O. Dawoud, "Perioperative risk factors predisposing to atrial fibrillation after CABG surgery", Heart Surg Forum, vol. 24, issue 2, pp. E402-E406, 2021. Abstract
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Afify, H. A., M. Sytnyk, S. Zhou, A. Osvet, C. J. Brabec, J. R. Korczak, A. Szczerbak, T. Story, and W. Heiss, "Perspectives of solution epitaxially grown defect tolerant lead-halide-perovskites and lead-chalcogenides", Applied Physics Letters, vol. 119, pp. 230501-1-230501-4, 2021.
Zaghlol, K., S. Sakran, M. El-Sharkawi, and A. Said, "Petrographical, structural, and remote sensing–based mapping of Gebel Atawi area, central Eastern Desert, Egypt", Arabian Journal of Geosciences, vol. 14, pp. Paper No. 1368, 2021.
Saber, F. R., R. M. Ashour, A. M. El-Halawany, M. F. Mahomoodally, G. Ak, G. Zengin, and E. A. Mahrous, "Phytochemical profile, enzyme inhibition activity and molecular docking analysis of O. Berg.", Journal of enzyme inhibition and medicinal chemistry, vol. 36, issue 1, pp. 618-626, 2021. Abstract

leaves and fruits have been investigated as a source of diverse bioactive metabolites. Extract and eight metabolites isolated from leaves were evaluated for their enzymatic inhibitory activity against α-glucosidase, amylase, tyrosinase, acetylcholinestrerase and butyrylcholinesterase both and . leaves' extract showed strong antioxidant activity and variable levels of inhibitions against target enzymes with a strong anti-tyrosinase activity (115.85 mg Kojic acid equivalent/g). Additionally, α-tocopherol emerged as a potent inhibitor of AChE and BChE (5.40 & 10.38 mmol galantamine equivalent/g, respectively). Which was further investigated through molecular docking and found to develop key enzymatic interactions in AChE and BChE active sites. Also, primetin showed good anti BChE (11.70 mmol galantamine equivalent/g) and anti-tyrosinase inhibition (90.06 mmol Kojic acid equivalent/g) which was also investigated by molecular docking studies. Highlights Isolation of eight bioactive constituents from leaves. assays using different enzymatic drug targets were investigated. study was performed to define compound interactions with target proteins. leaf is an excellent source of anti-AChE and antityrosinase bioactives.

Saber, F. R., R. M. Ashour, A. M. El-Halawany, M. F. Mahomoodally, G. Ak, G. Zengin, and E. A. Mahrous, "Phytochemical profile, enzyme inhibition activity and molecular docking analysis of O. Berg.", Journal of enzyme inhibition and medicinal chemistry, vol. 36, issue 1, pp. 618-626, 2021. Abstract

leaves and fruits have been investigated as a source of diverse bioactive metabolites. Extract and eight metabolites isolated from leaves were evaluated for their enzymatic inhibitory activity against α-glucosidase, amylase, tyrosinase, acetylcholinestrerase and butyrylcholinesterase both and . leaves' extract showed strong antioxidant activity and variable levels of inhibitions against target enzymes with a strong anti-tyrosinase activity (115.85 mg Kojic acid equivalent/g). Additionally, α-tocopherol emerged as a potent inhibitor of AChE and BChE (5.40 & 10.38 mmol galantamine equivalent/g, respectively). Which was further investigated through molecular docking and found to develop key enzymatic interactions in AChE and BChE active sites. Also, primetin showed good anti BChE (11.70 mmol galantamine equivalent/g) and anti-tyrosinase inhibition (90.06 mmol Kojic acid equivalent/g) which was also investigated by molecular docking studies. Highlights Isolation of eight bioactive constituents from leaves. assays using different enzymatic drug targets were investigated. study was performed to define compound interactions with target proteins. leaf is an excellent source of anti-AChE and antityrosinase bioactives.

Saber, F. R., R. M. Ashour, A. M. El-Halawany, M. F. Mahomoodally, G. Ak, G. Zengin, and E. A. Mahrous, "Phytochemical profile, enzyme inhibition activity and molecular docking analysis of Feijoa sellowiana O. Berg", Journal of Enzyme Inhibition and Medicinal Chemistry, vol. 36, issue 1: Taylor & Francis, pp. 618-626, 2021. Abstract
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Saber, F. R., R. M. Ashour, A. M. El-Halawany, M. F. Mahomoodally, G. Ak, G. Zengin, and E. A. Mahrous, "Phytochemical profile, enzyme inhibition activity and molecular docking analysis of Feijoa sellowiana O. Berg", Journal of enzyme inhibition and medicinal chemistry, vol. 36, issue 1: Taylor & Francis, pp. 618-626, 2021. Abstract
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Ezzat, S. M., A. Zayed, and M. A. Salem, "Phytosedatives for Drug Discovery", Poisonous Plants and Phytochemicals in Drug Discovery: Wiley, 2021.
Ezzat, S. M., M. A. Salem, and A. Zayed, "Plants against malarial and typhoid fever", Phytochemistry, the Military and Health: Elsevier, 2021.
Zaki, M. A., M. Ashour, A. M. M. Heneash, M. M. Mabrouk, A. E. Alprol, H. M. Khairy, A. M. Nour, A. T. Mansour, H. A. Hassanien, A. Gaber, et al., "Potential Applications of Native Cyanobacterium Isolate (Arthrospira platensis NIOF17/003) for Biodiesel Production and Utilization of Its Byproduct in Marine Rotifer (Brachionus plicatilis) Production", Sustainability, vol. 13, issue 4, pp. 1769-1785, 2021. sustainability-.pdf
Cromwell, E. A., J. C. P. Osborne, T. R. Unnasch, M. - G. Basáñez, K. M. Gass, K. A. Barbre, E. Hill, K. B. Johnson, K. M. Donkers, S. Shirude, et al., "Predicting the environmental suitability for onchocerciasis in Africa as an aid to elimination planning", PLoS Negl. Trop. Dis., vol. 15, no. 7: Public Library of Science (PLoS), pp. e0008824, 2021. Abstract

Recent evidence suggests that, in some foci, elimination of onchocerciasis from Africa may be feasible with mass drug administration (MDA) of ivermectin. To achieve continental elimination of transmission, mapping surveys will need to be conducted across all implementation units (IUs) for which endemicity status is currently unknown. Using boosted regression tree models with optimised hyperparameter selection, we estimated environmental suitability for onchocerciasis at the 5 $\times$ 5-km resolution across Africa. In order to classify IUs that include locations that are environmentally suitable, we used receiver operating characteristic (ROC) analysis to identify an optimal threshold for suitability concordant with locations where onchocerciasis has been previously detected. This threshold value was then used to classify IUs (more suitable or less suitable) based on the location within the IU with the largest mean prediction. Mean estimates of environmental suitability suggest large areas across West and Central Africa, as well as focal areas of East Africa, are suitable for onchocerciasis transmission, consistent with the presence of current control and elimination of transmission efforts. The ROC analysis identified a mean environmental suitability index of 0·71 as a threshold to classify based on the location with the largest mean prediction within the IU. Of the IUs considered for mapping surveys, 50·2% exceed this threshold for suitability in at least one 5 $\times$ 5-km location. The formidable scale of data collection required to map onchocerciasis endemicity across the African continent presents an opportunity to use spatial data to identify areas likely to be suitable for onchocerciasis transmission. National onchocerciasis elimination programmes may wish to consider prioritising these IUs for mapping surveys as human resources, laboratory capacity, and programmatic schedules may constrain survey implementation, and possibly delaying MDA initiation in areas that would ultimately qualify.

Cromwell, E. A., J. C. P. Osborne, T. R. Unnasch, M. - G. Basáñez, K. M. Gass, K. A. Barbre, E. Hill, K. B. Johnson, K. M. Donkers, S. Shirude, et al., "Predicting the environmental suitability for onchocerciasis in Africa as an aid to elimination planning.", PLoS neglected tropical diseases, vol. 15, issue 7, pp. e0008824, 2021. Abstract

Recent evidence suggests that, in some foci, elimination of onchocerciasis from Africa may be feasible with mass drug administration (MDA) of ivermectin. To achieve continental elimination of transmission, mapping surveys will need to be conducted across all implementation units (IUs) for which endemicity status is currently unknown. Using boosted regression tree models with optimised hyperparameter selection, we estimated environmental suitability for onchocerciasis at the 5 × 5-km resolution across Africa. In order to classify IUs that include locations that are environmentally suitable, we used receiver operating characteristic (ROC) analysis to identify an optimal threshold for suitability concordant with locations where onchocerciasis has been previously detected. This threshold value was then used to classify IUs (more suitable or less suitable) based on the location within the IU with the largest mean prediction. Mean estimates of environmental suitability suggest large areas across West and Central Africa, as well as focal areas of East Africa, are suitable for onchocerciasis transmission, consistent with the presence of current control and elimination of transmission efforts. The ROC analysis identified a mean environmental suitability index of 0·71 as a threshold to classify based on the location with the largest mean prediction within the IU. Of the IUs considered for mapping surveys, 50·2% exceed this threshold for suitability in at least one 5 × 5-km location. The formidable scale of data collection required to map onchocerciasis endemicity across the African continent presents an opportunity to use spatial data to identify areas likely to be suitable for onchocerciasis transmission. National onchocerciasis elimination programmes may wish to consider prioritising these IUs for mapping surveys as human resources, laboratory capacity, and programmatic schedules may constrain survey implementation, and possibly delaying MDA initiation in areas that would ultimately qualify.

Asaad, M., A. A. Saleh, I. Ryan, M. Amin, M. S. Saleh, T. Abdulaal, W. A. Hassan, M. Samir, A. A. Raouf, A. A. Khattab, et al., "Preliminary Step towards COVID-19 Inactivated Vaccine Development in Egypt", Archives of Clinical Trials, vol. 1, issue 1, pp. 1-6, 2021. preliminary_step_towards_covid-19_inactivated_vaccine_development_in_egypt.pdf
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