Tarek Moussa

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Extremophiles are a group of organisms growing in a wide range of extreme environmental conditions. The extremophilic microorganisms are diverse and are classified into psychrophiles (− 2°C to 20°C), thermophiles (55–121°C), piezophiles (> 500atm), halophiles (2–5M NaCl or KCl), metallophiles (high concentrations of metals, e.g., copper, zinc, lead, cadmium, and arsenic), alkaliphiles (pH>8), and acidophiles (pH<4) according to the extreme environmental conditions in which they grow and can tolerate. The aims of this chapter are to characterize the extremophilic microorganisms and their physiological and molecular efficiencies in bioremediation processes. Interestingly, the remarkable adaptative abilities of extremophilic microorganisms make them an attractive source of biocatalysts for bioremediation. Bioremediation is an important technology for the cleanup of environmental contaminants. Further attention has also been directed to isolation, identification, and characterization of biocatalysts from extremophilic microorganisms, most of them enzymes named extremozymes, which are well adapted to be active also at extreme conditions. Extremozymes are expected to fill the gap between biological and chemical industrial processes because of the remarkable properties of these enzymes. Even though more than 3000 different enzymes have been identified till now, and many of these were used in industrial and biotechnological applications, the enzyme toolbox at the present is still not enough to present demands. A major cause for this is the fact that many available enzymes do not withstand industrial reaction conditions.

Levan is an industrially important, functional biopolymer with considerable applications in the food and pharmaceutical fields owing to its safety and biocompatibility. Here, levan-type exopolysaccharide produced by Pantoea agglomerans ZMR7 was purified by cold ethanol precipitation and characterized using TLC, FTIR, 1H, and 13C NMR spectroscopy. The maximum production of levan (28.4 g/l) was achieved when sucrose and ammonium chloride were used as carbon and nitrogen sources, respectively, at 35°C and an initial pH of 8.0. Some biomedical applications of levan like antitumor, antiparasitic, and antioxidant activities were investigated in vitro. The results revealed the ability of levan at different concentrations to decrease the viability of rhabdomyosarcoma and breast cancer cells compared with untreated cancer cells. Levan appeared also to have high antiparasitic activity against the promastigote of Leishmania tropica. Furthermore, levan had strong DPPH radical scavenging (antioxidant) activity. These findings suggest that levan produced by P. agglomerans ZMR7 can serve as a natural biopolymer candidate for the pharmaceutical and medical fields.

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This study aimed to compare the fungal rhizosphere communities of Rhazya stricta, Enneapogon desvauxii, Citrullus colocynthis, Senna italica, and Zygophyllum simplex, and the gut mycobiota of Poekilocerus bufonius (Orthoptera, Pyrgomorphidae, “Usherhopper”). A total of 164,485 fungal reads were observed from the five plant rhizospheres and Usherhopper gut. The highest reads were in S. italica rhizosphere (29,883 reads). Species richness in the P. bufonius gut was the highest among the six samples. Ascomycota was dominant in all samples, with the highest reads in E. desvauxii (26,734 reads) rhizosphere. Sordariomycetes and Dothideomycetes were the dominant classes detected with the highest abundance in C. colocynthis and E. desvauxii rhizospheres. Aspergillus and Ceratobasidium were the most abundant genera in the R. stricta rhizosphere, Fusarium and Penicillium in the E. desvauxii rhizosphere and P. bufonius gut, Ceratobasidium and Myrothecium in the C. colocynthis rhizosphere, Aspergillus and Fusarium in the S. italica rhizosphere, and Cochliobolus in the Z. simplex rhizosphere. Aspergillus terreus was the most abundant species in the R. stricta and S. italica rhizospheres, Fusarium sp. in E. desvauxii rhizosphere, Ceratobasidium sp. in C. colocynthis rhizosphere, Cochliobolus sp. in Z. simplex rhizosphere, and Penicillium sp. in P. bufonius gut. The phylogenetic results revealed the unclassified species were related closely to Ascomycota and the species in E. desvauxii, S. italica and Z. simplex rhizospheres were closely related, where the species in the P. bufonius gut, were closely related to the species in the R. stricta, and C. colocynthis rhizospheres.

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