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2021
Saber, A., H. Zeineldin, T. El-Fouly, and A. Al-Durra, "Time-Domain Fault Location Algorithm for Double-Circuit Transmission Lines Connected to Large Scale Wind Farms", IEEE Access, vol. 9, pp. 11393-11404, 2021.
Mohamed, A. A., D. Omran, S. El-Feky, H. Darwish, A. E. L. Kassas, A. Farouk, O. Ezzat, S. M. Abdo, F. E. Zahran, A. El-Demery, et al., "Toll-like receptor 7 mRNA is reduced in hepatitis C-based liver cirrhosis and hepatocellular carcinoma, out-performs alpha-fetoprotein levels, and with age and serum aspartate aminotransferase is a new diagnostic index", Br J Biomed Sci . , vol. 78, issue 1, pp. 18-22. , 2021.
El-Shafie, A. - H. A., M. Zaki, and S. E. D. Habib, "Towards an Efficient Hardware Implementation of CNN-Based Object Trackers", 2021 IEEE International Symposium on Circuits and Systems (ISCAS): IEEE, pp. 1–5, 2021. Abstract
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Hendy, R., and C. Zaki, "Trade Facilitation and Firms’ Exports: Evidence from Customs Data", International Review of Economics and Finance, vol. 75, pp. 197–209, 2021.
Martínez-Zarzoso, I., M. Said, and C. Zaki, "Trade Policy and Input Liberalization: The Effect on Egyptian Firms Productivity”, Productivity and Input Liberalization", Review of Development Economics, vol. 25, issue 3, pp. 1305-1325, 2021.
Ma, B., Y. Li, M. Khalifa, M. Teng, A. Zhang, Q. Zhao, A. Lamboro, D. Yao, and J. Zhang, Transcriptional Profiles of Long Non-coding RNAs Involved in Fatty Acid Biosynthesis at Filling Stage of Soybean Pods, , 2021. Abstract
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Shen-he Liu, X. -ya Ma, Ting-ting Yue, Zi-chen Wang, Kun-long Qi, Ji-chao Li, Feng Lin, Hossam E. Rushdi, Yu-yang Gao, Tong Fu, et al., "Transcriptome-Wide m6A Analysis Provides Novel Insights Into Testicular Development and Spermatogenesis in Xia-Nan Cattle", Frontiers in Cell and Developmental Biology, vol. 9, pp. 1-13, 2021.
Nassar, H., A. Hasanin, M. Sewilam, H. Ahmed, M. Abo-elsoud, O. Taalab, A. Rady, and H. A. Zoheir, "Transmuscular Quadratus Lumborum Block versus Suprainguinal Fascia Iliaca Block for Hip Arthroplasty: A Randomized, Controlled Pilot Study.", Local and regional anesthesia, vol. 14, pp. 67-74, 2021. Abstract

Background: This study aimed to investigate the analgesic efficacy and motor block profile of single-shot transmuscular quadratus lumborum block (QLB) in comparison with those of suprainguinal fascia iliaca block (FIB) in patients undergoing hip arthroplasty.

Methods: This randomized, double-blinded, controlled trial included adult patients undergoing hip arthroplasty under spinal anesthesia. Patients were allocated to one of two groups according to the regional block received: FIB group (n=19) or QLB group (n=17). Both study groups were compared with regard to the duration of analgesia (primary outcome), block performance time, pain during positioning for spinal anesthesia, total morphine consumption in the first postoperative 24-h period, quadriceps muscle power, and static and dynamic visual analog scale.

Results: Thirty-six patients were included in the final analysis. Both study groups had comparable durations of analgesia. Postoperative visual analog scale (static and dynamic) values were comparable between the two groups in most readings. The block performance time was shorter in the FIB group. The number of patients with pain during positioning for the subarachnoid block was lower in the QLB group. The total morphine requirement during the first 24 h was marginally lower in the FIB group, whereas the quadriceps motor grade was higher in the FIB group than in the QLB group at 4 h and 6 h after surgery.

Conclusion: Both single-shot blocks, namely the suprainguinal FIB and transmuscular QLB, provide effective postoperative analgesia after hip arthroplasty. FIB showed slightly lower 24-h morphine consumption, while QLB showed better quadriceps motor power.

Clinical Trial Registration: The study was registered at clinical trials registry system before enrollment of the first participant (NCT04005326; initial release date, 2 July 2019; https://clinicaltrials.gov/ct2/show/NCT04005326).

Nassar, H., A. Hasanin, M. Sewilam, H. Ahmed, M. Abo-elsoud, O. Taalab, A. Rady, and H. A. Zoheir, "Transmuscular Quadratus Lumborum Block versus Suprainguinal Fascia Iliaca Block for Hip Arthroplasty: A Randomized, Controlled Pilot Study.", Local and regional anesthesia, vol. 14, pp. 67-74, 2021. Abstract

BACKGROUND: This study aimed to investigate the analgesic efficacy and motor block profile of single-shot transmuscular quadratus lumborum block (QLB) in comparison with those of suprainguinal fascia iliaca block (FIB) in patients undergoing hip arthroplasty.

METHODS: This randomized, double-blinded, controlled trial included adult patients undergoing hip arthroplasty under spinal anesthesia. Patients were allocated to one of two groups according to the regional block received: FIB group (n=19) or QLB group (n=17). Both study groups were compared with regard to the duration of analgesia (primary outcome), block performance time, pain during positioning for spinal anesthesia, total morphine consumption in the first postoperative 24-h period, quadriceps muscle power, and static and dynamic visual analog scale.

RESULTS: Thirty-six patients were included in the final analysis. Both study groups had comparable durations of analgesia. Postoperative visual analog scale (static and dynamic) values were comparable between the two groups in most readings. The block performance time was shorter in the FIB group. The number of patients with pain during positioning for the subarachnoid block was lower in the QLB group. The total morphine requirement during the first 24 h was marginally lower in the FIB group, whereas the quadriceps motor grade was higher in the FIB group than in the QLB group at 4 h and 6 h after surgery.

CONCLUSION: Both single-shot blocks, namely the suprainguinal FIB and transmuscular QLB, provide effective postoperative analgesia after hip arthroplasty. FIB showed slightly lower 24-h morphine consumption, while QLB showed better quadriceps motor power.

CLINICAL TRIAL REGISTRATION: The study was registered at clinical trials registry system before enrollment of the first participant (NCT04005326; initial release date, 2 July 2019; https://clinicaltrials.gov/ct2/show/NCT04005326).

Kilany, L. A., A. A. Gaber, M. M. Aboulwafa, and H. H. Zedan, "Trastuzumab immunogenicity development in patients’ sera and in laboratory animals", BMC Immunology, vol. 23, issue 1, pp. 1-15, 2021.
Alboraie, M., A. Cordie, W. Ismail, A. Abu-Elfatth, D. Ziada, A. Gomaa, M. Hussien, M. Abdallah, M. Ibrahim, and E. Adel, "Treatment of hepatitis c with direct acting antiviral drugs can protect against severe acute respiratory syndrome coronavirus 2 infection", United European Gastroenterology Journal, pp. 693-694, 2021. Abstract
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Zaki, S. A., S. A. Ouf, F. M. Albarakaty, M. M. Habeb, A. A. Aly, and K. A. Abd-Elsalam, "Trichoderma harzianum-Mediated ZnO Nanoparticles: A Green Tool for Controlling Soil-Borne Pathogens in Cotton", Journal of Fungi, vol. 7, no. 11, 2021. AbstractWebsite

ZnO-based nanomaterials have high antifungal effects, such as inhibition of growth and reproduction of some pathogenic fungi, such as Fusarium sp., Rhizoctonia solani and Macrophomina phaseolina. Therefore, we report the extracellular synthesis of ZnONPs using a potential fungal antagonist (Trichoderma harzianum). ZnONPs were then characterized for their size, shape, charge and composition by visual analysis, UV–visible spectrometry, X-ray diffraction (XRD), Zeta potential, transmission electron microscopy (TEM), scanning electron microscopy (SEM) and energy-dispersive X-ray analysis (EDX). The TEM test confirmed that the size of the produced ZnONPs was 8–23 nm. The green synthesized ZnONPs were characterized by Fourier transform infrared spectroscopy (FTIR) studies to reveal the functional group attributed to the formation of ZnONPs. For the first time, trichogenic ZnONPs were shown to have fungicidal action against three soil–cotton pathogenic fungi in the laboratory and greenhouse. An antifungal examination was used to evaluate the bioactivity of the mycogenic ZnONPs in addition to two chemical fungicides (Moncut and Maxim XL) against three soil-borne pathogens, including Fusarium sp., Rhizoctonia solani and Macrophomina phaseolina. The findings of this study show a novel fungicidal activity in in vitro assay for complete inhibition of fungal growth of tested plant pathogenic fungi, as well as a considerable reduction in cotton seedling disease symptoms under greenhouse conditions. The formulation of a trichogenic ZnONPs form was found to increase its antifungal effect significantly. Finally, the utilization of biocontrol agents, such as T. harzianum, could be a safe strategy for the synthesis of a medium-scale of ZnONPs and employ it for fungal disease control in cotton.

Nassar, A., A. M. Lymona, M. M. Lotfy, A. S. E. - D. Youssef, and A. - R. N. Zekri, "Tumor mutation burden of Egyptian breast cancer patients based on next generation sequencing", Cancer Research, vol. 81, no. 13\_Supplement: The American Association for Cancer Research, pp. 257–257, 2021. Abstract
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Nassar, A., A. M. Lymona, M. M. Lotfy, A. S. E. - D. Youssef, M. Mohanad, T. M. Manie, M. M. G. Youssef, I. G. Farahat, and A. - R. N. Zekri, "Tumor mutation burden prediction model in Egyptian breast cancer patients based on next generation sequencing", Asian Pacific Journal of Cancer Prevention: APJCP, vol. 22, no. 7: Shahid Beheshti University of Medical Sciences, pp. 2053, 2021. Abstract
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Nassar, A., A. M. Lymona, M. M. Lotfy, A. S. E. - D. Youssef, M. Mohanad, T. M. Manie, M. M. G. Youssef, I. G. Farahat, and A. - R. N. Zekri, "Tumor Mutation Burden Prediction Model in Egyptian Breast Cancer patients based on Next Generation Sequencing.", Asian Pacific journal of cancer prevention : APJCP, vol. 22, issue 7, pp. 2053-2059, 2021. Abstract

OBJECTIVES: This study aimed to identify the tumor mutation burden (TMB) value in Egyptian breast cancer (BC) patients. Moreover, to find the best TMB prediction model based on the expression of estrogen (ER), progesterone (PR), human epidermal growth factor receptor 2 (HER-2), and proliferation index Ki-67.

METHODS: The Ion AmpliSeq Comprehensive Cancer Panel was used to determine TMB value of 58 Egyptian BC tumor tissues. Different machine learning models were used to select the optimal classification model for prediction of TMB level according to patient's receptor status.

RESULTS: The measured TMB value was between 0 and 8.12/Mb. Positive expression of ER and PR was significantly associated with TMB ≤ 1.25 [(OR =0.35, 95% CI: 0.04-2.98), (OR = 0.17, 95% CI= 0.02-0.44)] respectively. Ki-67 expression positive was significantly associated with TMB >1.25 than those who were Ki-67 expression negative (OR = 9.33, 95% CI= 2.07-42.18). However, no significant differences were observed between HER2 positive and HER2 negative groups. The optimized logistic regression model was TMB = -27.5 -1.82 ER - 0.73 PR + 0.826 HER2 + 2.08 Ki-67.

CONCLUSION: Our findings revealed that TMB value can be predicted based on the expression level of ER, PR, HER-2, and Ki-67.

Zhang, L., F. R. Saber, G. Rocchetti, G. Zengin, M. M. Hashem, and L. Lucini, "UHPLC-QTOF-MS based metabolomics and biological activities of different parts of Eriobotrya japonica.", Food research international (Ottawa, Ont.), vol. 143, pp. 110242, 2021. Abstract

Eriobotrya japonica, commonly known as loquat, has been used traditionally for the treatment of different diseases. Herein, untargeted profiling based on ultra-high-performance liquid chromatography coupled with quadrupole time-of-flight mass spectrometry (UHPLC-QTOF-MS) was used to depict the phytochemical profile of loquat roots, leaves, stems, seeds, and fruits. This allowed the tentative annotation of 349 compounds, representing different phytochemical classes that included flavonoids, phenolic acids, lignans, stilbenes, and terpenoids. Among others, low molecular weight phenolics (tyrosol derivatives) and terpenoids were the most abundant phytochemicals. After that, in vitro antioxidant and enzyme inhibition assays were applied to investigate the biological activity of the different organs of Eriobotrya japonica. Roots of E. japonica exhibited the highest antioxidant capacity, showing 181.88, 275.48, 325.18, 169.74 mg Trolox equivalent (TE)/g in DPPH, ABTS, CUPRAC, and FRAP assays, respectively. Furthermore, the root extract of E. japonica strongly inhibited butyryl cholinesterase (3.64 mg galantamine equivalent (GALAE)/g), whereas leaves, stems, seeds, and fruits showed comparable inhibition of both acetyl and butyryl cholinesterases. All the investigated organs of E. japonica exhibited in vitro tyrosinase inhibition (57.27-71.61 mg Kojic Acid Equivalent (KAE)/g). Our findings suggest a potential food and pharmaceutical exploitation of different organs of E. japonica (mainly roots) in terms of enrichment with health-promoting phenolics and triterpenes.

Zhang, L., G. Rocchetti, G. Zengin, G. Ak, F. R. Saber, D. Montesano, and L. Lucini, "The UHPLC-QTOF-MS Phenolic Profiling and Activity of Mill. Reveals a Promising Nutraceutical Potential.", Foods (Basel, Switzerland), vol. 10, issue 6, 2021. Abstract

Mill., normally known as the quince fruit, has been widely used in agro-food industries mainly to produce jams and jellies. However, other parts of the plants are still underutilized and not completely assessed for their nutraceutical profile. Therefore, in this work, the polyphenolic profile of was investigated using an untargeted metabolomics approach based on high-resolution mass spectrometry. Several compounds were identified in the different parts of the plants, including flavonoids (i.e., anthocyanins, flavones, flavan-3-ols, and flavonols), phenolic acids (both hydroxycinnamics and hydroxybenzoics), low-molecular-weight phenolics (tyrosol equivalents), lignans, and stilbenes. Overall, leaves showed the highest in vitro antioxidant potential, as revealed by 2,2-difenil-1-picrylhydrazyl (DPPH), 2,2'-Azino-bis(3-ethylbenzthiazoline-6-sulfonic acid) (ABTS), ferric reducing antioxidant power (FRAP), and cupric ion reducing antioxidant capacity (CUPRAC) assays, being 189.5, 285.6, 158.9, and 348.8 mg Trolox Equivalent/g, respectively. The enzymes acetyl- and butyryl-cholinesterases were both inhibited by the different plant parts of , with stems showing the higher inhibitory potential. Interestingly, the fruit extracts were the only parts inhibiting the α-glucosidase, with a value of 1.36 mmol acarbose equivalents (ACAE)/g. On the other hand, strong tyrosinase inhibition was found for stems and leaves, being 72.11 and 68.32 mg Kojic acid Equivalent/g, respectively. Finally, a high number of significant (0.05 < < 0.01) correlations were outlined between phenolics (mainly anthocyanins, flava-3-ols, and tyrosol equivalents) and the different biological assays. Taken together, our findings suggest a potential exploitation of leaves and stems for the food, pharmaceutical, and cosmetic industries.

Zaky, M.A., Ameen, I.G., Elkot, N.A., and E. H. Doha, "A unified spectral collocation method for nonlinear systems of multidimensional integral equations with convergence analysis ", Applied Numerical Mathematics, vol. 161, pp. 27-45, 2021.
El-Wahed, A. A. A., M. A. Farag, W. A.Eraqi, G. A. M. Mersal, C. Zhao, S. A. M. Khalifa, and H. R. El-Seedi, "Unravelling the beehive air volatiles profile as analysed via solid-phase microextraction (SPME) and chemometrics", Journal of King Saud University - Science, vol. 33, 2021.
Zaki, N. S., and R. F. Hilal, "Use of a novel quantitative tool for evaluation of pseudo-acanthosis nigricans: acanthosis nigricans area and severity index (ANASI)", Journal of Egyptian Women Dermatologic Society, 2021.
Prats-Uribe, A., A. G. Sena, L. Y. H. Lai, W. - U. - R. Ahmed, H. Alghoul, O. Alser, T. M. Alshammari, C. Areia, W. Carter, P. Casajust, et al., "Use of repurposed and adjuvant drugs in hospital patients with covid-19: multinational network cohort study.", BMJ (Clinical research ed.), vol. 373, pp. n1038, 2021. Abstract

OBJECTIVE: To investigate the use of repurposed and adjuvant drugs in patients admitted to hospital with covid-19 across three continents.

DESIGN: Multinational network cohort study.

SETTING: Hospital electronic health records from the United States, Spain, and China, and nationwide claims data from South Korea.

PARTICIPANTS: 303 264 patients admitted to hospital with covid-19 from January 2020 to December 2020.

MAIN OUTCOME MEASURES: Prescriptions or dispensations of any drug on or 30 days after the date of hospital admission for covid-19.

RESULTS: Of the 303 264 patients included, 290 131 were from the US, 7599 from South Korea, 5230 from Spain, and 304 from China. 3455 drugs were identified. Common repurposed drugs were hydroxychloroquine (used in from <5 (<2%) patients in China to 2165 (85.1%) in Spain), azithromycin (from 15 (4.9%) in China to 1473 (57.9%) in Spain), combined lopinavir and ritonavir (from 156 (<2%) in the VA-OMOP US to 2,652 (34.9%) in South Korea and 1285 (50.5%) in Spain), and umifenovir (0% in the US, South Korea, and Spain and 238 (78.3%) in China). Use of adjunctive drugs varied greatly, with the five most used treatments being enoxaparin, fluoroquinolones, ceftriaxone, vitamin D, and corticosteroids. Hydroxychloroquine use increased rapidly from March to April 2020 but declined steeply in May to June and remained low for the rest of the year. The use of dexamethasone and corticosteroids increased steadily during 2020.

CONCLUSIONS: Multiple drugs were used in the first few months of the covid-19 pandemic, with substantial geographical and temporal variation. Hydroxychloroquine, azithromycin, lopinavir-ritonavir, and umifenovir (in China only) were the most prescribed repurposed drugs. Antithrombotics, antibiotics, H2 receptor antagonists, and corticosteroids were often used as adjunctive treatments. Research is needed on the comparative risk and benefit of these treatments in the management of covid-19.

EL-Houssini, O. M., N. H. Zawilla, and M. A. - A. Mohammad, "Validated RP-LC methods for investigating the degradation behavior of acefylline: Application for analysis in two binary mixtures", Current Pharmaceutical Analysis, vol. 17, issue 6, pp. 801-811, 2021.
Sedik, G. A., S. A. Attya, F. A.Morsy, Doha M. Naguib, and hala Zazaa, "Validated Stability Indicating Chromatographic Methods for Quantification of Imidocarb Dipropionate; Application for the Determination of Its Residues in Bovine Meat and Milk Samples", Journal of AOAC INTERNATIONAL, vol. 103, issue 4, pp. 980-988, 2021.
El Koofy, N. M., N. A. Mohsen, M. A. Elmonem, R. H. Zawam, and S. Tarek, "Validity of the Vesikari Score for the Assessment of Pediatric Acute Gastroenteritis in Correlation with Nutritional and Socioeconomic Influences.", Indian journal of pediatrics, 2021.
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