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2021
Abdelhafiz, A. S., M. A. Fouda, N. A. Elzefzafy, I. I. Taha, O. M. Mohemmed, N. H. Alieldin, ImanToony, A. A. A. Wahab, and I. G. Farahat, "Gene expression analysis of invasive breast carcinoma yields differential patterns in luminal subtypes of breast cancer", Annals of Diagnostic Pathology, vol. 55, pp. 151814, 2021. AbstractWebsite

Breast cancer is a heterogeneous disease, and new biomarkers are needed for more accurate classification and prediction of prognosis. The goal of this study is to assess the expression of breast cancer classification genes, to identify new molecular signatures in different intrinsic subtypes of breast cancer and to correlate their expression with different clinical variables. The study included 84 female patients newly diagnosed with non-metastatic breast cancer at the outpatient clinic at the National Cancer Institute, Cairo University, Egypt. Detection of 17 breast cancer classification genes was done using RT-PCR in tumor and normal tissues. Estrogen receptor (ER), progesterone receptor (PR), HER2, and Ki67 expression were assessed using IHC assay for intrinsic subtyping. Combined expression of FOXA1 and GATA3 was statistically higher in luminal subtypes in comparison to non-luminal subtypes. In Luminal A subtype; GRB7, EGFR, PTGS2, ID1, and KRT5 were significantly downregulated. FOXA1 and GATA3 were significantly upregulated in luminal B subtype, where EGFR and PTGS2 were significantly downregulated. While ESR1, EGFR, KRT5 and PTGS2 showed significantly low expression in tumor tissue in Her2 enriched subtype, TFF3 was significantly downregulated in triple negative subtype. GATA3 and FOXA1 expression exhibited significant correlation with tumor grade. Furthermore, GATA3, FOXA1, ESR1, and ID1 were also correlated significantly with staging of the tumor. Combined expression of ESR1, FOXA1 and GATA3 represents a molecular signature of luminal subtypes. Long term follow-up is needed to investigate the prognostic effect of breast cancer classification genes found in this study.

Abdelhafiz, A. S., N. A. Elzefzafy, M. A. Fouda, I. I. Taha, O. M. Mohemmed, N. H. Alieldin, ImanToony, A. A. A. Wahab, and I. G. Farahat, "Gene expression analysis of invasive breast carcinoma yields differential patterns in luminal subtypes of breast cancer", Annals of Diagnostic Pathology, vol. 55, 2021. annals_of_diagnostic_pathology_10.pdf
Abdelhafiz, A. S., M. A. Fouda, N. A. Elzefzafy, I. I. Taha, O. M. Mohemmed, N. H. Alieldin, ImanToony, A. A. A. Wahab, and I. G. Farahat, "Gene expression analysis of invasive breast carcinoma yields differential patterns in luminal subtypes of breast cancer", Annals of Diagnostic Pathology, vol. 55: WB Saunders, pp. 151814, 2021. Abstract
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Shaimaa, A. M., K. A. Maimona, H. M. Rehab, M. A. Osama, A. N. Mohamed, M. H. Mohamed, A. S. M. Alsamman, H. A., and T. W., "Genome-Wide Association Study Of Agronomy And Morphology Traits In Elite Spring Wheat Germplasm Evaluated Under Salt Stress Conditions In Egypt. ", Plant Cell Biotechnology And Molecular Biology , vol. 22, issue 65-66, pp. 88-98, 2021. 1_shaimaa2265662021pcbmb9793.pdf
Shaimaa, A. M., K. A. Maimona, H. M. Rehab, M. A. Osama, A. N. Mohamed, M. H. Mohamed, A. S. M. Alsamman, H. A., and T. W., "GENOME-WIDE ASSOCIATION STUDY OF AGRONOMY AND MORPHOLOGY TRAITS IN ELITE SPRING WHEAT GERMPLASM EVALUATED UNDER SALT STRESS CONDITIONS IN EGYPT", Plant Cell Biotechnology and Molecular Biology, vol. 22, issue (65&66), pp. 88-98, 2021. 1_shaimaa2265662021pcbmb9793.pdf
Abu-Seida, A. M., M. N. Wafy, E. A. Hassan, and K. A. Ahmed, "Gigantic Ocular Squamous Cell Carcinoma Mixed With Fibrosarcoma in a Mare: Clinical, Laboratory, Ultrasonography and Histopathology Findings", Journal of Equine Veterinary Science, vol. 102, pp. 103639, 2021. ocular_scc.pdf
Abu-Seida, A. M., M. N. Wafy, E. A. Hassan, and K. A. Ahmed, "Gigantic Ocular Squamous Cell Carcinoma Mixed With Fibrosarcoma in a Mare: Clinical, Laboratory, Ultrasonography and Histopathology Findings", Journal of Equine Veterinary Science, vol. 102, pp. 1-7, 2021.
Abu-Seida, A. M., M. N. WAFY, E. A. Hassan, and K. A. Ahmed, "Gigantic Ocular Squamous Cell Carcinoma Mixed With Fibrosarcoma in a Mare: Clinical, Laboratory, Ultrasonography and Histopathology Findings", Journal of Equine Veterinary Science, vol. 102, 2021. AbstractWebsite
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Abu-Seida, A. M., M. N. Wafy, E. A. Hassan, and K. A. Ahmed, "Gigantic Ocular Squamous Cell Carcinoma Mixed With Fibrosarcoma in a Mare: Clinical, Laboratory, Ultrasonography and Histopathology Findings.", Journal of equine veterinary science, vol. 102, pp. 103639, 2021. Abstract

Ocular neoplasms represent 10% of all equine neoplasms and ocular squamous cell carcinoma (OSCC) is the most common one. This report describes the clinical presentation, laboratory, ultrasonography, postmortem, histopathology and immunohistochemistry findings of a mixed ocular neoplasm in a 10-year-old draft mare. The mare had a one-year history of left ocular mass. Complete destruction of the left eye with loss of vision was observed. A large ulcerated mass oozing blood replaced the left eye. Left parotid lymph node was swollen and had a sinus tract discharging pus. Ultrasonography revealed absence of all intraocular structures, several lobular echogenic tissues and several hyperechoic areas of ossification with acoustic shadowing. Color Doppler scanning revealed numerous neovascularization all over the tumor, particularly along the periphery. The neovascularization demonstrated mainly arterial with few mixed blood flow signals. The amplitude of systolic and diastolic blood flow was markedly increased. Enucleation was decided but the mare died just after examination. The ocular mass was excised and its weight was 390 g. Postmortem examination revealed no distant metastasis in all internal organs. Histopathology confirmed OSCC mixed with fibrosarcoma and associated with cartilaginous and osseous metaplasia. The neoplastic cells gave positive nuclear p53 immunoreactivity. The left parotid lymph node revealed metastasis. Despite the unsuccessful outcome in this particular case, this report documents a mixed eye neoplasm, highlights the ultrasonography and histopathology features of OSCC, and reinforces the need for early diagnosis and surgical treatment in such cases to improve the outcome and to decrease the drastic complications and mortality.

Sivarajan, S., S. A. Mani, J. John, M. S. M. Fayed, Y. - A. Kook, and M. C. Wey, "The global distribution of permanent canine hypodontia: A systematic review", Korean Journal of Orthodontics, vol. 51, issue 1, pp. 55-74, 2021. the_global_distribution_of_permanent_canine_hypodontia-_a_systematic_review.pdf
Apostolopoulos, V., J. Bojarska, T. - T. Chai, S. Elnagdy, K. Kaczmarek, J. Matsoukas, R. N. K. Parang, O. P. L. H. Parhiz, C. P. M. P. M. R. M. S. M. S. Y. T. O. Wojcie, M. AlKhazindar, et al., "A Global Review on Short Peptides: Frontiers and Perspectives", Molecules, vol. 26, issue 430, pp. 1-45, 2021.
Abdulwahab, D. K., W. W. Ibrahim, R. A. A. El-Aal, H. A. Abdel-Latif, and N. F. Abdelkader, "Grape Seed Extract Improved the Fertility-Enhancing Effect of Atorvastatin in High Fat Diet-Induced Testicular Injury in Rats: Involvement of Anti-oxidant and Anti-Apoptotic Effects", Journal of Pharmacy and Pharmacology, vol. 73, pp. 366-376, 2021.
ADEL, M., A. H. A. A. Wahab, A. Abdel-Mawgood, and A. O. Egiza, "Graphene Oxide as a Substrate for Biosensors: Synthesis and Characterization", Solid State Phenomena, vol. 324, pp. 87-93, 2021. solid_state_phenomena_5.pdf
Wu, K., W. Shi, and W. Ahmed, "Grid-based approach for the segmentation of multiple rooms from unstructured indoor point clouds", Journal of Applied Remote Sening, vol. 15, issue 4, pp. 1-17, 2021.
Jabborova, D., S. Wirth, M. Halwani, M. F. M. Ibrahim, I. E. H. Azab, M. M. El-Mogy, and A. Elkelish, "Growth Response of Ginger (Zingiber officinale), Its Physiological Properties and Soil Enzyme Activities after Biochar Application under Greenhouse Conditions", Horticulturae, vol. 7, issue 8: Multidisciplinary Digital Publishing Institute, pp. 250, 2021. Abstract
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Elkholy, M. A. R., I. S. Waked, N. A. - E. Afify, and A. N. A. Rashied, "HELIUM NEON LASER VERSUS GALLIUM ARSENIDE LASER IN HEALING OF VENOUS ULCERS", Turkish Journal of Physiotherapy and Rehabilitation, vol. 32, issue 3, pp. 14404-14410, 2021. 32-1-1765.pdf
Cordie, A., R. Mohamed, M. W. Sonderup, C. Wendy Spearman, M. A. Medhat, N. Debzi, H. Desalegn, and G. Esmat, "Hepatitis C elimination in Africa: Seizing the moment for hepatitis-C free future.", Arab journal of gastroenterology : the official publication of the Pan-Arab Association of Gastroenterology, vol. 22, issue 3, pp. 249-251, 2021.
El-Gendy, Z. A., S. A. El-Batran, S. A. H. Youssef, A. Ramadan2, and R. A. 15 F. and Walid El Hotaby3, Rofanda M Bakeer4, "Hepatoprotective effect of Omega-3 PUFAs against acute paracetamolinduced hepatic injury confirmed by FTIR", Human and Experimental Toxicology, 2021.
Moussa, H. A., R. Wasfi, N. F. Abdeltawab, and S. A. Megahed, "High Counts and Anthracene Degradation Ability of and Isolated From the Oral Cavity of Cigarette Smokers and Non-smokers.", Frontiers in microbiology, vol. 12, pp. 661509, 2021. Abstractfmicb-12-661509.pdf

The composition and metabolic functions of oral microbiota are affected by many factors including smoking leading to several health problems. Cigarette smoking is associated with changes in oral microbiota composition and function. However, it is not known if the depletion of certain bacterial genera and species is due to specific toxins in cigarette smoke, or indirectly due to competition for colonization with smoking-enriched bacteria. Therefore, the aim of this study was to determine the effect of cigarette smoking on the microbial prevalence and polycyclic aromatic hydrocarbons (PAHs) biodegradation of selected enriched and depleted oral bacteria from oral microbiota of smokers compared to that in non-smokers. Samples of oral rinse from smokers and non-smokers were collected ( = 23, 12 smokers and 11 non-smokers) and screened for oral bacterial strains of spp., and spp. Comparing counts, , , and showed higher counts in smokers compared to non-smokers while the spp. were higher in non-smokers. was prevalent in smokers, representing 91.67% of the total Lactobacillus spp. isolates. The biodegradation potential of anthracene; a representative of PAHs of collected isolates, in single and mixed cultures, was assayed with anthracene as the sole source of carbon using 2,6-dichlorophenol indophenol (2,6-DCPIP) as indicator. isolates recovered from smokers showed higher degradation of anthracene compared to those recovered from non-smokers. The anaerobic anthracene biodegradation activity of isolates from non-smokers was the highest among all isolates of the three recovered genera from the same subject. The anthracene biodegradation potential of spp. was variable. Combinations of isolated bacteria in co-cultures showed that spp. interfered with anthracene biodegradation ability along with the viable counts of and spp. In conclusion, oral dysbiosis due to cigarette smoking was observed not only due to changes in oral bacterial relative abundance but also extended to bacterial functions such as anthracene biodegradation tested in this study. Microbe-microbe interactions changed the anthracene biodegradation potential and growth of the microbial mixture compared to their corresponding single isolates, and these changes differ according to the constituting bacteria.

Zaghloul, M. A. S., J. H. Mason, M. Wang, M. Buric, Z. Peng, S. Lee, P. Ohodnicki, H. Abernathy, and K. P. Chen, "High spatial resolution temperature profile measurements of solid-oxide fuel cells", Applied Energy, vol. 288: Elsevier, pp. 116633, 2021. Abstract
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Mansour, S., S. Wallace, V. Sadiraj, and M. Hassan, "How Do Electoral and Voice Accountability Affect Corruption? Experimental Evidence from Egypt", European Journal of Political Economy, vol. 68, issue June 2021, pp. 101994, 2021.
Mansour, S., S. Wallace, V. Sadiraj, and M. Hassan, "How Do Electoral and Voice Accountability Affect Corruption? Experimental Evidence from Egypt", European Journal of Political Economy, vol. 68, issue June 2021, pp. 101994, 2021.
Bofana, J., M. Zhang, B. Wu, H. Zeng, M. Nabil, N. Zhang, A. Elnashar, F. Tian, J. M. da Silva, A. Botão, et al., "How long did crops survive from floods caused by Cyclone Idai in Mozambique detected with multi-satellite data", Remote Sensing of Environment, vol. 269, pp. 112808, 2021. AbstractWebsite

Floods are causing massive losses of crops and agricultural infrastructures in many regions across the globe. During the 2018/2019 agricultural year, heavy rains from Cyclone Idai caused flooding in Central Mozambique and had the greatest impact on Sofala Province. The main objectives of this study are to map the flooding durations, evaluate how long crops survived the floods, and analyse the dynamics of the affected crops and their recovery following various flooding durations using multi-source satellite data. Our results indicate that Otsu method-based flooding mapping provides reliable flood extents and durations with an overall accuracy higher than 90%, which facilitates the assessment of how long crops can survive floods and their recovery progress. Croplands in both Buzi and Tica administrative units were the most severely impacted among all the regions in Sofala Province, with the largest flooded cropland extent at 23,101.1 ha in Buzi on 20 March 2019 and the most prolonged flooding duration of more than 42 days in Tica and Mafambisse. Major summer crops, including maize and rice, could survive when the fields were inundated for up to 12 days, while all crops died when the flooding duration was longer than 24 days. The recovery of surviving crops to pre-flooding status took a much longer time, from approximately 20 days to as long as one month after flooding. The findings presented herein can assist decision making in developing countries or remote regions for flood monitoring, mitigation and damage assessment.

Warda, A. E. A., M. Tammam, R. M. S. Rabab Ahmed Elgazzar, and S. Gaber, "Hydroxychloroquine and Azithromycin Combination in The Management of COVID-19 Infection: Safety and Effectiveness Challenges", Curr Drug Saf. 2021., vol. 7, issue Kjuly2021, pp. 9, 2021.
Warda, A. E. A., M. Tammam, R. M. S. Rabab Ahmed Elgazzar, and S. Gaber, "Hydroxychloroquine and Azithromycin Combination in The Management of COVID-19 Infection: Safety and Effectiveness Challenges", Curr Drug Saf. 2021., vol. 7, issue Kjuly2021, pp. 9, 2021.
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