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2024
Haggagy, M. G., L. A. Ahmed, Marwa Sharaky, M. M. ElHefnawi, and M. M. Omran, "SIRT1 as a potential key regulator for mediating apoptosis in oropharyngeal cancer using cyclophosphamide and all-trans retinoic acid.", Scientific reports, vol. 14, issue 1, pp. 41, 2024. Abstract

Although cyclophosphamide (CTX) has been used for recurrent or metastatic head and neck cancers, resistance is usually expected. Thus, we conducted this study to examine the effect of adding all-trans retinoic acid (ATRA) to CTX, to increase efficacy of CTX and reduce the risk of resistance developed. In this study, we investigated the combined effect of ATRA and CTX on the expression of apoptotic and angiogenesis markers in oropharyngeal carcinoma cell line (NO3), and the possible involved mechanisms. ATRA and CTX in combination significantly inhibited the proliferation of NO3 cells. Lower dose of CTX in combination with ATRA exhibited significant cytotoxicity than that of CTX when used alone, implying lower expected toxicity. Results showed that ATRA and CTX modulated oxidative stress; increased NOx and MDA, reduced GSH, and mRNA expression of Cox-2, SIRT1 and AMPK. Apoptosis was induced through elevating mRNA expressions of Bax and PAR-4 and suppressing that of Bcl-xl and Bcl-2, parallel with increased caspases 3 and 9 and decreased VEGF, endothelin-1 and CTGF levels. The primal action of the combined regimen on inflammatory signaling highlights its impact on cell death in NO3 cell line which was mediated by oxidative stress associated with apoptosis and suppression of angiogenesis.

Haggagy, M. G., L. A. Ahmed, Marwa Sharaky, M. M. ElHefnawi, and M. M. Omran, "SIRT1 as a potential key regulator for mediating apoptosis in oropharyngeal cancer using cyclophosphamide and all-trans retinoic acid.", Scientific reports, vol. 14, issue 1, pp. 41, 2024. Abstract

Although cyclophosphamide (CTX) has been used for recurrent or metastatic head and neck cancers, resistance is usually expected. Thus, we conducted this study to examine the effect of adding all-trans retinoic acid (ATRA) to CTX, to increase efficacy of CTX and reduce the risk of resistance developed. In this study, we investigated the combined effect of ATRA and CTX on the expression of apoptotic and angiogenesis markers in oropharyngeal carcinoma cell line (NO3), and the possible involved mechanisms. ATRA and CTX in combination significantly inhibited the proliferation of NO3 cells. Lower dose of CTX in combination with ATRA exhibited significant cytotoxicity than that of CTX when used alone, implying lower expected toxicity. Results showed that ATRA and CTX modulated oxidative stress; increased NOx and MDA, reduced GSH, and mRNA expression of Cox-2, SIRT1 and AMPK. Apoptosis was induced through elevating mRNA expressions of Bax and PAR-4 and suppressing that of Bcl-xl and Bcl-2, parallel with increased caspases 3 and 9 and decreased VEGF, endothelin-1 and CTGF levels. The primal action of the combined regimen on inflammatory signaling highlights its impact on cell death in NO3 cell line which was mediated by oxidative stress associated with apoptosis and suppression of angiogenesis.

Alhaddad, H., O. E. Ospina, M. L. Khaled, Y. Ren, E. Vallebuona, M. B. Boozo, P. A. Forsyth, Y. Pina, R. Macaulay, V. Law, et al., "Spatial transcriptomics analysis identifies a tumor-promoting function of the meningeal stroma in melanoma leptomeningeal disease.", Cell reports. Medicine, vol. 5, issue 6, pp. 101606, 2024. Abstractspatial_transcriptomics_analysis_identifies_a_tumor-promoting_function_of_the_meningeal_stroma_in_melanoma_leptomeningeal_disease.pdf

Leptomeningeal disease (LMD) remains a rapidly lethal complication for late-stage melanoma patients. Here, we characterize the tumor microenvironment of LMD and patient-matched extra-cranial metastases using spatial transcriptomics in a small number of clinical specimens (nine tissues from two patients) with extensive in vitro and in vivo validation. The spatial landscape of melanoma LMD is characterized by a lack of immune infiltration and instead exhibits a higher level of stromal involvement. The tumor-stroma interactions at the leptomeninges activate tumor-promoting signaling, mediated through upregulation of SERPINA3. The meningeal stroma is required for melanoma cells to survive in the cerebrospinal fluid (CSF) and promotes MAPK inhibitor resistance. Knocking down SERPINA3 or inhibiting the downstream IGR1R/PI3K/AKT axis results in tumor cell death and re-sensitization to MAPK-targeting therapy. Our data provide a spatial atlas of melanoma LMD, identify the tumor-promoting role of meningeal stroma, and demonstrate a mechanism for overcoming microenvironment-mediated drug resistance in LMD.

Youssef R.A., A. W.M., G. O.N., and H. A.B., "A spotlight on Retama spp., the Mediterranean evergreen stemassimilating xerophyte", Egyptian Journal of Botany, vol. 64, issue 2, pp. 467-495, 2024.
Omran, E., A. - A. Tahoun, M. Said, Z. Sharawy, and A. Suloma, "The Synergistic Effect of Dietary Protein and Periphyton enhances the Growth, Feed Consumption, and Gene Expression of Litopenaeus vannamei in Biofloc systems.", Egyptian Journal of Aquatic Biology & Fisheries, vol. 28, issue 2, 2024. Abstract
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Dawood, D. H., A. M. Srour, M. A. Omar, T. A. Farghaly, and R. A. El-Shiekh, "Synthesis and molecular docking simulation of new benzimidazole–thiazole hybrids as cholinesterase inhibitors", Archiv der Pharmazie, vol. 357, no. 1, pp. 2300201, 2024. Abstract
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Ouf, S. A., S. M. Gomha, B. Farag, M. E. A. Zaki, M. M. Ewies, I. A. A. Sharawy, F. O. Khalil, and H. K. Mahmoud, "Synthesis of novel Bis-1, 2, 4-Triazolo [3, 4-b][1, 3, 4] Thiadiazines from natural camphoric acid as potential anti-candidal agents", Results in Chemistry, vol. 7: Elsevier, pp. 101406, 2024. Abstract
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Elghazaly, H., H. A. Azim, H. S. Rugo, D. Cameron, S. M. Swain, G. Curigliano, N. Harbeck, D. Tripathy, B. Arun, M. Aapro, et al., "Tailoring neo/adjuvant systemic therapy in breast cancer: "The advent of a personalized approach"-The Breast-Gynecological and Immuno-Oncology International Cancer Conference (BGICC) consensus and recommendations.", Cancer , 2024.
Aya Abdel Nasser Mahmoud, E. A. Ahmed, and A. R. Omar, "Thiacloprid impairs reproductive functions of male Wistar rat", Naunyn-Schmiedeberg's Archives of Pharmacology , 2024.
Mokhtar, G., A. Adly, A. Abdel Baky, D. Ezzat, G. Abdel Hakeem, H. Hassab, I. Youssry, I. Ragab, I. Florez, L. M. Sherief, et al., "Transfusion of blood components in pediatric age groups: an evidence-based clinical practice guideline adapted for the use in Egypt using ‘Adapted ADAPTE’", Annals of Hematology: Springer, 2024. Abstract
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Mokhtar, G., A. Adly, A. Abdel Baky, D. Ezzat, G. Abdel Hakeem, H. Hassab, I. Youssry, I. Ragab, I. Florez, L. M. Sherief, et al., "Transfusion of blood components in pediatric age groups: an evidence-based clinical practice guideline adapted for the use in Egypt using ‘Adapted ADAPTE’", Annals of Hematology: Springer, 2024. Abstract
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Tumasyan, A., W. Adam, J. W. Andrejkovic, T. Bergauer, S. Chatterjee, K. Damanakis, M. Dragicevic, A. Escalante Del Valle, P. S. Hussain, M. Jeitler, et al., "Two-particle Bose-Einstein correlations and their Lévy parameters in PbPb collisions at s NN= 5.02 TeV", Physical Review C, vol. 109, no. 2: APS, pp. 024914, 2024. Abstract
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Abdel-Reheim, M. A., Y. Nomier, M. B. Zaki, A. I. Abulsoud, O. A. Mohammed, A. A. Rashad, M. A. Oraby, M. S. Elballal, M. M. E. Tabaa, O. Elazazy, et al., "Unveiling the regulatory role of miRNAs in stroke pathophysiology and diagnosis.", Pathology, research and practice, vol. 253, pp. 155085, 2024. Abstract

Stroke, a major global cause of mortality, leads to a range of problems for those who survive. Besides its brutal events, stroke also tends to have a characteristic of recurrence, making it a complex disease involving intricate regulatory networks. One of the major cellular regulators is the non-coding RNAs (ncRNA), specifically microRNAs (miRNAs), thus the possible functions of miRNAs in the pathogenesis of stroke are discussed as well as the possibility of using miRNA-based therapeutic approaches. Firstly, the molecular mechanisms by which miRNAs regulate vital physiological processes, including synaptic plasticity, oxidative stress, apoptosis, and the integrity of the blood-brain barrier (BBB) are reviewed. The miRNA indirectly impacts stroke outcomes by regulating BBB function and angiogenesis through the targeting of transcription factors and angiogenic factors. In addition, the tendency for some miRNAs to be upregulated in response to hypoxia, which is a prevalent phenomenon in stroke and various neurological disorders, highlights the possibility that it controls hypoxia-inducible factor (HIF) signaling and angiogenesis, thereby influencing the integrity of the BBB as examples of the discussed mechanisms. Furthermore, this review explores the potential therapeutic targets that miRNAs may offer for stroke recovery and highlights their promising capacity to alleviate post-stroke complications. This review provides researchers and clinicians with valuable resources since it attempts to decipher the complex network of miRNA-mediated mechanisms in stroke. Additionally, the review addresses the interplay between miRNAs and stroke risk factors as well as clinical applications of miRNAs as diagnostic and prognostic markers.

Taleb, H. M., K. Mahrose, A. A. Abdel-Halim, H. A. Kasem, G. S. Ramadan, A. M. Fouad, A. F. Khafaga, N. E. Khalifa, M. Kamal, H. M. Salem, et al., "Using artificial intelligence to improve poultry productivity–a review", Annals of Animal Science, 2024. Abstract

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Abdallah, W., and others, "{CEPC Technical Design Report: Accelerator}", Radiat. Detect. Technol. Methods, vol. 8, no. 1, pp. 1–1105, 2024. Abstract
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Abdallah, W., and others, "{CEPC Technical Design Report: Accelerator}", Radiat. Detect. Technol. Methods, vol. 8, no. 1, pp. 1–1105, 2024. Abstract
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2023
Zeini, N. T., and A. E. Okasha, "Governance and Sustainable Development: A Bibliometric Analysis", The 2023 Institute of National Planning (INP) International Conference on “Governance and Sustainable Development” in cooperation with the School of International and Public Affairs (SIPA), Colombia University, 3-4 June 2023, Cairo, Egypt., 2023/6.
Tilz, R. R., V. Schmidt, H. Pürerfellner, P. Maury, K. R. J. ulian Chun, M. Martinek, C. Sohns, B. Schmidt, F. Mandel, E. Gandjbakhch, et al., A worldwide survey on incidence, management, and prognosis of oesophageal fistula formation following atrial fibrillation catheter ablation: the POTTER-AF study, , vol. 44, issue 27, pp. 2458 - 2469, 2023/07/14. AbstractWebsite

Oesophageal fistula represents a rare but dreadful complication of atrial fibrillation catheter ablation. Data on its incidence, management, and outcome are sparse.This international multicentre registry investigates the characteristics of oesophageal fistulae after treatment of atrial fibrillation by catheter ablation. A total of 553 729 catheter ablation procedures (radiofrequency: 62.9%, cryoballoon: 36.2%, other modalities: 0.9%) were performed, at 214 centres in 35 countries. In 78 centres 138 patients [0.025%, radiofrequency: 0.038%, cryoballoon: 0.0015% (P < 0.0001)] were diagnosed with an oesophageal fistula. Peri-procedural data were available for 118 patients (85.5%). Following catheter ablation, the median time to symptoms and the median time to diagnosis were 18 (7.75, 25; range: 0–60) days and 21 (15, 29.5; range: 2–63) days, respectively. The median time from symptom onset to oesophageal fistula diagnosis was 3 (1, 9; range: 0–42) days. The most common initial symptom was fever (59.3%). The diagnosis was established by chest computed tomography in 80.2% of patients. Oesophageal surgery was performed in 47.4% and direct endoscopic treatment in 19.8% and conservative treatment in 32.8% of patients. The overall mortality was 65.8%. Mortality following surgical (51.9%) or endoscopic treatment (56.5%) was significantly lower as compared to conservative management (89.5%) [odds ratio 7.463 (2.414, 23.072) P < 0.001].Oesophageal fistula after catheter ablation of atrial fibrillation is rare and occurs mostly with the use of radiofrequency energy rather than cryoenergy. Mortality without surgical or endoscopic intervention is exceedingly high.

Awaly, S. B. H., N. H. Osman, H. M. Farag, I. H. Yacoub, M. Mahmoud-Aly, N. I. Elarabi, and D. S. Ahmed, "Evaluation of the morpho-physiological traits and the genetic diversity of durum wheat’s salt tolerance induced by silver nanoparticles", Journal of Agriculture and Environment for International Development, vol. 117, issue 2, pp. 161 - 184, 2023///. AbstractWebsite
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Turner, D., A. N. Shkoporov, C. Lood, A. D. Millard, B. E. Dutilh, P. Alfenas-Zerbini, L. J. van Zyl, R. K. Aziz, H. M. Oksanen, and M. M. Poranen, Abolishment of morphology-based taxa and change to binomial species names: 2022 taxonomy update of the ICTV bacterial viruses subcommittee, , vol. 168, issue 2: Springer, pp. 74, 2023. Abstract
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Osman, E. O., S. H. Emam, A. Sonousi, M. M. Kandil, A. M. Abdou, and R. A. Hassan, "Design, synthesis, anticancer, and antibacterial evaluation of some quinazolinone-based derivatives as DHFR inhibitors", Drug Development ResearchDrug Development Research, vol. 84, issue 5: John Wiley & Sons, Ltd, pp. 888 - 906, 2023. AbstractWebsite

Abstract Two series of quinazolinone derivatives were designed and synthesized as dihydrofolate reductase (DHFR) inhibitors. All compounds were evaluated for their antibacterial and antitumor activities. Antibacterial activity was evaluated against three strains of Gram-positive and Gram-negative bacteria. Compound 3d exhibited the highest inhibitory activity against Staphylococcus aureus DHFR (SaDHFR) with IC50 of 0.769?±?0.04??M compared to 0.255?±?0.014??M for trimethoprim. Compound 3e was also more potent than trimethoprim against Escherichia coli DHFR (EcDHFR) with IC50 of 0.158?±?0.01??M and 0.226?±?0.014??M, respectively. Compound 3e exhibited a promising antiproliferative effect against most of the tested cancer cells. It also showed potent activity against leukemia (CCRF-CEM, and RPMI-8226); lung NCI-H522, and CNS U251 with GI% of 65.2, 63.22, 73.28, and 97.22, respectively. The cytotoxic activity of compound 3e was almost half the activity of doxorubicin against CCRF-CEM cell line with IC50 of 1.569?±?0.06??M and 0.822?±?0.03?µM, respectively. In addition, compound 3e inhibited human DHFR with IC50 value of 0.527?±?0.028?µM in comparison to methotrexate (IC50?=?0.118?±?0.006?µM). Compound 3e caused an arrest of the cell cycle mainly at the S phase and caused a rise in the overall apoptotic percentage from 2.03% to 48.51%. (23.89-fold). Treatment of CCRF-CEM cells with compound 3e produced a significant increase in the active caspase-3 level by 6.25-fold compared to untreated cells. Molecular modeling studies were performed to evaluate the binding pattern of the most active compounds in the bacterial and human DHFR.

Abdel-Mohsen, H. T., M. A. Omar, O. Kutkat, A. E. M. Kerdawy, A. A. Osman, M. Gaballah, A. Mostafa, M. A. Ali, and H. E. I. Diwani, "Discovery of novel thioquinazoline-N-aryl-acetamide/N-arylacetohydrazide hybrids as anti-SARS-CoV-2 agents: Synthesis, in vitro biological evaluation, and molecular docking studies", Journal of Molecular Structure, vol. 1276, pp. 134690, 2023. AbstractWebsite

In the current investigation, two novel series of (tetrahydro)thioquinazoline-N-arylacetamides and (tetrahydro)thioquinazoline-N-arylacetohydrazides were designed, synthesized and investigated for their antiviral activity against SARS-CoV-2. The thioquinazoline-N-arylacetamide 17g as well as the tetrahydrothioquinazoline-N-arylacetohydrazides 18c and 18f showed potent antiviral activity with IC50 of 21.4, 38.45 and 26.4 µM, respectively. In addition, 18c and 18f demonstrated potential selectivity toward the SARS-CoV-2 over the host cells with SI of 10.67 and 16.04, respectively. Further evaluation of the mechanism of action of the three derivatives 17g, 18c, and 18f displayed that they can inhibit the virus at the adsorption as well as at the replication stages, in addition to their virucidal properties. In addition, 17g, 18c, and 18f demonstrated satisfactory physicochemical properties as well as drug-likeness properties to be further optimized for the discovery of novel antiviral agents. The docking simulation on Mpro binding site predicted the binding pattern of the target compounds rationalizing their differential activity based on their hydrophobic interaction and fitting in the hydrophobic S2 subsite of the binding site

Kamal, M. A., M. A. Khalaf, Z. A. M. Ahmed, M. Fathy, H. M. F. E. Miniawy, A. M. Mahmoud, A. Osman, and M. A. Z. Ewiss, "Effect of Water Organic Load and Total Ammonia Nitrogen on Broilers’ Humoral Immune Response Against Newcastle Disease Virus Vaccination in Egypt", International Journal of Veterinary Science, vol. 12, issue 1: Unique Scientific Publishers, pp. 107 - 113, 2023. Abstract

Low-quality drinking water (DW) has a negative impact on poultry immunity raising the risk of emerging infections. The current trial used experimentally contaminated broilers’ DW to study its effect on humoral immunity compared to 2 control groups. A total of 450 unsexed 1-day-old Cobb chickens were randomly allocated into 6 groups (75 birds in 5 replicates per group). DW of (T1) had 24 ppm chemical oxygen demand (COD), (T2) 12 ppm COD, (T3) 15 ppm total ammonia nitrogen (TAN), (T4) 5 ppm TAN, (T5) normal tap water (TW), (T6) TW with immunostimulant (IMU FORT®) a day before and after vaccination. Birds were subjected to the NDV DW vaccination program, serum was collected weekly, antibody (Ab) titers were measured along 6 weeks, lymphoid organs somatic indices (OSI) were evaluated after carcass evisceration at the end of the trial (42nd day), and Postmortem lesions were examined. Groups showed differences in Ab titers however, the 3rd and 6th weeks showed significant differences (p≤0.05), at the 3rd week T3 titers were significantly higher than T1, T2 but lower than T4, T6, and at the 6th week T6 titers were significantly higher than T1, T3, T4 but T5 was significantly lower than T3. The lowest OSI was in T3 which records 0.475, 0.133, 0.101 for thymus, bursa, and spleen, respectively while T6 was the highest. Broilers’ DW which has a high organic load (COD) and TAN, significantly decreases Ab titers and OSI. Both good quality DW and immunostimulant supplementation have a positive effect on NDV vaccines’ immune response.