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2021
Alghanem, S. M., H. A. S. Alhaithloul, M. T. Abdelhamid, and M. H. Soliman, "Role of {Various} {Nanoparticles} in {Countering} {Heavy} {Metal}, {Salt}, and {Drought} {Stress} in {Plants}", Sustainable {Agriculture} {Reviews} 53: {Nanoparticles}: {A} {New} {Tool} to {Enhance} {Stress} {Tolerance}, Cham, Springer International Publishing, pp. 151–170, 2021. Abstract

The various forms of nanoparticles (NPs) designed so far and their application in crop plants for sustainable crop production is receiving great attention in today’s life. In plants, NPs minimize loss of nutrients, reduces various diseases and improves the growth and yields under different abiotic stresses. Application of various forms of NPs in plants affect seed germination, seedling vigor, respiration, flowering, initiation of roots, antioxidant defense responses, growth and photosynthesis and regulate responses to various abiotic stress conditions. The usage of various NPs is occupied in the plants’ to protect against induced oxidative stress as they have been found to mimic the role of various antioxidative enzymes. The high doses of NPs induces phytotoxic effect in plants as they orchestrates the production of various reactive oxygen species (ROS), whereas, low doses of NPs exert beneficiary results in various plants. Therefore, keeping in view such a conflicting and ambiguous situation of NPs, the present chapter deciphers the ameliorating role of various NPs under stressful environmental conditions like salt, drought and heavy metal stresses in crop plants. A brief explanation of NPs mediated control of vital plant processes under abiotic stresses is also presented.

Abdel-Aty, Y. Y. A., "Roles of timber tie-rods to reduce seismic vulnerability of historical buildings in Egypt.", Proceedings of the Institution of Civil Engineers – Structures and Buildings (ICE Publishing), vol. 174, issue 5, pp. 418-430, 2021.
Akl, H. E., A. R. El-Beialy, M. Abd El-Ghafour, A. M. Abouelezz, and F. A. El Sharaby, "Root resorption associated with maxillary buccal segment intrusion using variable force magnitudes.", The Angle orthodontist, vol. 91, issue 6, pp. 733-742, 2021. Abstract

OBJECTIVES: To compare the root resorption resulting from miniscrew-supported maxillary posterior dentoalveolar intrusion using two different force magnitudes.

MATERIALS AND METHODS: Adult patients with skeletal open bite, indicated for maxillary posterior dentoalveolar intrusion, were recruited and randomly assigned to the comparison or intervention groups. The comparison group involved applying 200 g of intrusive force per segment, which measured 20 g per root, while this force was 400 g per segment in the intervention group, measuring 40 g per root.

RESULTS: Twenty participants were included in the final analysis after 2 patients dropped out, 1 in each group, to end up with 10 subjects (200 roots) per group. There was statistically significant root resorption of 0.84 ± 0.96 mm and 0.93 ± 1.00 mm in the comparison and the intervention groups, respectively. However, there was no statistically significant difference between the groups.

CONCLUSIONS: Root resorption inevitably took place in association with orthodontic intrusion. However, increasing the magnitude of the intrusive force did not increase the amount of root resorption, either statistically or clinically.

Akl, H. E., A. R. El-Beialy, M. Abd El-Ghafour, A. M. Abouelezz, and F. A. El Sharaby, "Root resorption associated with maxillary buccal segment intrusion using variable force magnitudes.", The Angle orthodontist, vol. 91, issue 6, pp. 733-742, 2021. Abstract

OBJECTIVES: To compare the root resorption resulting from miniscrew-supported maxillary posterior dentoalveolar intrusion using two different force magnitudes.

MATERIALS AND METHODS: Adult patients with skeletal open bite, indicated for maxillary posterior dentoalveolar intrusion, were recruited and randomly assigned to the comparison or intervention groups. The comparison group involved applying 200 g of intrusive force per segment, which measured 20 g per root, while this force was 400 g per segment in the intervention group, measuring 40 g per root.

RESULTS: Twenty participants were included in the final analysis after 2 patients dropped out, 1 in each group, to end up with 10 subjects (200 roots) per group. There was statistically significant root resorption of 0.84 ± 0.96 mm and 0.93 ± 1.00 mm in the comparison and the intervention groups, respectively. However, there was no statistically significant difference between the groups.

CONCLUSIONS: Root resorption inevitably took place in association with orthodontic intrusion. However, increasing the magnitude of the intrusive force did not increase the amount of root resorption, either statistically or clinically.

Akl, H. E., A. R. El-Beialy, M. Abd El-Ghafour, A. M. Abouelezz, and F. A. El Sharaby, "Root resorption associated with maxillary buccal segment intrusion using variable force magnitudes: A randomized clinical trial.", The Angle orthodontist, 2021. Abstract

OBJECTIVES: To compare the root resorption resulting from miniscrew-supported maxillary posterior dentoalveolar intrusion using two different force magnitudes.

MATERIALS AND: Methods: Adult patients with skeletal open bite, indicated for maxillary posterior dentoalveolar intrusion, were recruited and randomly assigned to the comparison or intervention groups. The comparison group involved applying 200 g of intrusive force per segment, which measured 20 g per root, while this force was 400 g per segment in the intervention group, measuring 40 g per root.

RESULTS: Twenty participants were included in the final analysis after 2 patients dropped out, 1 in each group, to end up with 10 subjects (200 roots) per group. There was statistically significant root resorption of 0.84 ± 0.96 mm and 0.93 ± 1.00 mm in the comparison and the intervention groups, respectively. However, there was no statistically significant difference between the groups.

CONCLUSIONS: Root resorption inevitably took place in association with orthodontic intrusion. However, increasing the magnitude of the intrusive force did not increase the amount of root resorption, either statistically or clinically.

abdel kader, R., S. El-Noamany, and K. Makarem, "Rotating the Tip in Long Noses: A Strategy rather than a Single Technique.", Plastic and reconstructive surgery. Global open, vol. 9, issue 6, pp. e3629, 2021. Abstract

BACKGROUND: Rhinoplasty is one of the most commonly performed aesthetic surgical procedures in plastic surgery, the incidence of which has increased up to approximately 1 million cases in 2016 according to the recent International Society of Aesthetic Plastic Surgery survey. This study aimed at defining the importance of each sequential procedure within the same surgery, the extent to which a procedure can be performed, and those that can be omitted.

METHODS: In this descriptive study, 27 candidates (18 women; nine men; age range, 20-48 years) for primary rhinoplasty between September 2016 and September 2019 were included. All had long noses, their main concern was reduction of nasal tip projection and all were seeking cranial tip rotation to enhance their tip aesthetics. Those who required revision rhinoplasty or who had nasal deformities due to congenital defects, and those older than 60 or younger than 18 years of age, were excluded.

RESULTS: The average nasolabial angle in women preoperatively was 88.2 ± 6.6 and postoperatively 102.8 ± 5.6. In men, the average average nasolabial angle preoperatively was 79.6 ± 5.4 and postoperatively 92.3 ± 2.3. In both men and women, the value was <0.001, which indicates high significance. Tip rotation was achieved in all patients, with 81% achieving ideal rotation, and 19% exceeding the ideal range.

CONCLUSIONS: Rotating the tip in long noses is a complex procedure. It can be achieved by many described techniques, but not all are required. A general strategy should be followed during which variable techniques, with varying efficacy, can be utilized.

Motawi, T. M. K., N. A. H. Sadik, D. Sabry, S. A. Fahim, and N. N. Shahin, "rs62139665 Polymorphism in the Promoter Region of EpCAM Is Associated With Hepatitis C Virus-Related Hepatocellular Carcinoma Risk in Egyptians.", Frontiers in oncology, vol. 11, pp. 754104, 2021. Abstract

Hepatocellular carcinoma (HCC) is a universal health problem that is particularly alarming in Egypt. The major risk factor for HCC is hepatitis C virus (HCV) infection which is a main burden in Egypt. The epithelial cell adhesion molecule (EpCAM) is a stem cell marker involved in the tumorigenesis and progression of many malignancies, including HCC. We investigated the association of -935 C/G single nucleotide polymorphism in EpCAM promoter region (rs62139665) with HCC risk, EpCAM expression and overall survival in Egyptians. A total of 266 patients (128 HCV and 138 HCC cases) and 117 age- and sex-matched controls participated in this study. Genotyping, performed using allelic discrimination and confirmed by sequencing, revealed a significant association between EpCAM rs62139665 and HCC susceptibility, with higher GG genotype and G allele distribution in HCC patients than in non-HCC subjects. Such association was not detected in HCV patients compared to controls. EpCAM gene expression levels, determined in blood by RT-qPCR, and its serum protein expression levels, determined by ELISA, were significantly higher in GG relative to GC+CC genotype carriers in HCV and HCC patients in a recessive model. ROC analysis of EpCAM protein levels revealed significant discriminatory power between HCC patients and non-HCC subjects, with improved diagnostic accuracy when combining α-fetoprotein and EpCAM compared to that of α-fetoprotein alone. Altogether, EpCAM rs62139665 polymorphism is significantly associated with HCC and with EpCAM gene and protein expression levels in the Egyptian population. Moreover, serum EpCAM levels may hold promise for HCC diagnosis and for improving the diagnostic accuracy of α-fetoprotein.

Tsai, E. B., S. Simpson, M. P. Lungren, M. Hershman, L. Roshkovan, E. Colak, B. J. Erickson, G. Shih, A. Stein, J. Kalpathy-Cramer, et al., "The RSNA International COVID-19 Open Radiology Database (RICORD).", Radiology, vol. 299, issue 1, pp. E204-E213, 2021. Abstractradiol.2021203957.pdf

The coronavirus disease 2019 (COVID-19) pandemic is a global health care emergency. Although reverse-transcription polymerase chain reaction testing is the reference standard method to identify patients with COVID-19 infection, chest radiography and CT play a vital role in the detection and management of these patients. Prediction models for COVID-19 imaging are rapidly being developed to support medical decision making. However, inadequate availability of a diverse annotated data set has limited the performance and generalizability of existing models. To address this unmet need, the RSNA and Society of Thoracic Radiology collaborated to develop the RSNA International COVID-19 Open Radiology Database (RICORD). This database is the first multi-institutional, multinational, expert-annotated COVID-19 imaging data set. It is made freely available to the machine learning community as a research and educational resource for COVID-19 chest imaging. Pixel-level volumetric segmentation with clinical annotations was performed by thoracic radiology subspecialists for all COVID-19-positive thoracic CT scans. The labeling schema was coordinated with other international consensus panels and COVID-19 data annotation efforts, the European Society of Medical Imaging Informatics, the American College of Radiology, and the American Association of Physicists in Medicine. Study-level COVID-19 classification labels for chest radiographs were annotated by three radiologists, with majority vote adjudication by board-certified radiologists. RICORD consists of 240 thoracic CT scans and 1000 chest radiographs contributed from four international sites. It is anticipated that RICORD will ideally lead to prediction models that can demonstrate sustained performance across populations and health care systems.

Adnan Awad, S., O. Dufva, A. Ianevski, B. Ghimire, J. Koski, P. Maliniemi, D. Thomson, A. Schreiber, C. A. Heckman, P. Koskenvesa, et al., "RUNX1 mutations in blast-phase chronic myeloid leukemia associate with distinct phenotypes, transcriptional profiles, and drug responses", Leukemia, vol. 35, no. 4: Nature Publishing Group, pp. 1087–1099, 2021. Abstract
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El-Shiekh, R. A., A. Salama, A. K. Al-Mokaddem, A. Bader, and E. A. Abdel-Sattar, "Russelioside B; A pregnane glycoside for treatment of gastric ulcer via modulation of heat shock protein-70 and vascular endothelial growth factor", Steroids, vol. 165: Elsevier, pp. 108759, 2021. Abstract
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El-Maadawy, W. H., S. S. H. el-Din, S. M. Ezzat, O. A. Hammam, M. M. Safar, S. Saleh, and N. M. El-Lakkany, "Rutin Ameliorates Hepatic Fibrosis via Targeting Hepatic Stellate Cells’ Activation, Proliferation and Apoptosis ", Journal of Herbs, Spices & Medicinal Plants , vol. 27, issue 3, pp. 322–341, 2021. rutin_walaa_elmadawy.pdf
Elsayed, M. M., H. M. El-Barmelgy, and M. Hussien, "Redesigning the garbage collection area system (Zrayeb 15th May)", 5 th IUGRC International Undergraduate Research Conference, Military Technical College, Cairo, Egypt, Aug 9th – Aug 12st, 2021., 2021. Redesigning the garbage collection area system (Zrayeb 15th May)
Qiao, L., L. Xu, L. Yu, J. Wynn, R. Hernan, X. Zhou, C. Farkouh-Karoleski, U. S. Krishnan, J. Khlevner, A. De, et al., Rare and de novo variants in 827 congenital diaphragmatic hernia probands implicate LONP1 as candidate risk gene, , vol. 108, issue 10, pp. 1964 - 1980, 2021. AbstractWebsite

SummaryCongenital diaphragmatic hernia (CDH) is a severe congenital anomaly that is often accompanied by other anomalies. Although the role of genetics in the pathogenesis of CDH has been established, only a small number of disease-associated genes have been identified. To further investigate the genetics of CDH, we analyzed de novo coding variants in 827 proband-parent trios and confirmed an overall significant enrichment of damaging de novo variants, especially in constrained genes. We identified LONP1 (lon peptidase 1, mitochondrial) and ALYREF (Aly/REF export factor) as candidate CDH-associated genes on the basis of de novo variants at a false discovery rate below 0.05. We also performed ultra-rare variant association analyses in 748 affected individuals and 11,220 ancestry-matched population control individuals and identified LONP1 as a risk gene contributing to CDH through both de novo and ultra-rare inherited largely heterozygous variants clustered in the core of the domains and segregating with CDH in affected familial individuals. Approximately 3% of our CDH cohort who are heterozygous with ultra-rare predicted damaging variants in LONP1 have a range of clinical phenotypes, including other anomalies in some individuals and higher mortality and requirement for extracorporeal membrane oxygenation. Mice with lung epithelium-specific deletion of Lonp1 die immediately after birth, most likely because of the observed severe reduction of lung growth, a known contributor to the high mortality in humans. Our findings of both de novo and inherited rare variants in the same gene may have implications in the design and analysis for other genetic studies of congenital anomalies.

Emara, A. ’a, and R. Shah, Recent update on craniofacial tissue engineering, , vol. 12: SAGE Publications Sage UK: London, England, pp. 20417314211003735, 2021. Abstract
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Ibrahim, I. M., A. A. Elfiky, and A. M. Elgohary, "Recognition through GRP78 is enhanced in the UK, South African, and Brazilian variants of SARS-CoV-2; An in silico perspective", Biochemical and Biophysical Research Communications, vol. 562, pp. 89 - 93, 2021. Abstract
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Ibrahim, I. M., A. A. Elfiky, and A. M. Elgohary, "Recognition through GRP78 is enhanced in the UK, South African, and Brazilian variants of SARS-CoV-2; An in silico perspective", Biochemical and Biophysical Research Communications, vol. 562, pp. 89 - 93, 2021. AbstractWebsite

New SARS-CoV-2 variants emerged in the United Kingdom and South Africa in December 2020 in concomitant with the Brazillian variant in February 2021 (B.1.1.248 lineage) and currently sparking worldwide during the last few months. The new strain 501.V2 in South Africa bears three mutations in the spike receptor-binding domain (RBD); K417 N, E484K, and N501Y, while the Brazilian B.1.1.248 lineage has 12 mutations. In the current study, we simulate the complex ACE2-SARS-CoV-2 spike RBD system in which the RBD is in the wild-type and mutated isoforms. Additionally, the cell-surface Glucose Regulated Protein 78 (CS-GRP78) associated with the ACE2-SARS-CoV-2 spike RBD complex (ACE2-S RBD) is modeled at the presence of these mutant variants of the viral spike. The results showed that E484K and N501Y are critical in viral spike recognition through either ACE2 or CS-GRP78. The mutated variants (the UK, South African, and Brazilian) of the spike RBD tightly bind to GRP78 more than in the case of the wild-type RBD. These results point to the potent role of GRP78 with ACE2 in the attachment of the new variants, which could be a key for the design of inhibitors to block SARS-CoV-2 attachment and entry to the host cell. © 2021 Elsevier Inc.

Annaby, M. H., and S. R. Elsayed-Abdullah, Rectangles of positive eigenvalues with positive eigenfunctions of nonlinear multiparameter coupled systems, , vol. 23, issue 4, pp. 68, 2021. AbstractWebsite

Existence rectangles of positive eigenvalues with corresponding positive eigenfunctions of 2p-order and 2q-order nonlinear coupled multiparameter systems of ordinary differential equations are introduced. The boundary conditions are related to the Abel–Whittaker interpolation problem $$f^{(2k)}(1) =a_k,\,f^{(2k+1)}(0) =b_k,\,k\ge 0$$. The multiplicity of the eigenvalues are also investigated. Under standard conditions, we prove the existence of rectangles of non-simple eigenvalues with multiplicities greater than or equal to two.

El-Salamony, M., A. Moharam, and A. Guaily, Regression Modeling for the Ventilation Effect on COVID-19 Spreading in Metro Wagons, : IEEE, pp. 55 - 58, 2021. Abstract
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Qari, S. H., A. M. Abdulmajeed, T. S. Alnusaire, and M. H. Soliman, "Responses of Crop Plants Under Nanoparticles Supply in Alleviating Biotic and Abiotic Stresses", Sustainable Agriculture Reviews 53, vol. 53, Cham, Springer International Publishing, pp. 231 - 246, 2021. Abstract
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Qari, S. H., A. M. Abdulmajeed, T. S. Alnusaire, and M. H. Soliman, "Responses of Crop Plants Under Nanoparticles Supply in Alleviating Biotic and Abiotic Stresses", Sustainable Agriculture Reviews 53: Nanoparticles: A New Tool to Enhance Stress Tolerance, Cham, Springer International Publishing, pp. 231 - 246, 2021. Abstract

Crop plants are continuously exposed to abiotic and biotic constraints like salt, drought, heat, heavy metal, ultraviolet, fungi, bacteria, pathogens etc. Plants respond to them by altering their physiology and metabolism. The response is initiated at molecular, cellular and at whole plant level. Plants undergo alterations in growth, photosynthesis, yield and quality attributes when exposed to stresses. Nevertheless, these complex processes are modulated by the application of different kinds of nanoparticles (NPs). In the current times, nanotechnology, as a broad interdisciplinary area of research, finds potential in agriculture regarding plant disease management, pathogen detection and imparting stress tolerance. Nanoparticles at particular concentrations control growth, morpho-physiology and yield attributes under stress conditions. In the present chapter, we attempt to discuss various response alterations initiated by crop plants towards abiotic and biotic stresses, vis-à-vis controlling nature of various NPs doses in protecting these processes under these stress conditions.

Nassar, A., I. M. Ibrahim, F. G. Amin, M. Magdy, A. M. Elgharib, E. B. Azzam, F. Nasser, K. Yousry, I. M. Shamkh, S. M. Mahdy, et al., "A review of human coronaviruses’ receptors: The host-cell targets for the crown bearing viruses", Molecules, vol. 26, issue 21, 2021. Abstract
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Nassar, A., I. M. Ibrahim, F. G. Amin, M. Magdy, A. M. Elgharib, E. B. Azzam, F. Nasser, K. Yousry, I. M. Shamkh, S. M. Mahdy, et al., "A review of human coronaviruses’ receptors: The host-cell targets for the crown bearing viruses", Molecules, vol. 26, issue 21, 2021. AbstractWebsite

A novel human coronavirus prompted considerable worry at the end of the year 2019. Now, it represents a significant global health and economic burden. The newly emerged coronavirus disease caused by the severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) is the primary reason for the COVID-19 global pandemic. According to recent global figures, COVID-19 has caused approximately 243.3 million illnesses and 4.9 million deaths. Several human cell receptors are involved in the virus identification of the host cells and entering them. Hence, understanding how the virus binds to host-cell receptors is crucial for developing antiviral treatments and vaccines. The current work aimed to determine the multiple host-cell receptors that bind with SARS-CoV-2 and other human coronaviruses for the purpose of cell entry. Extensive research is needed using neutralizing antibodies, natural chemicals, and therapeutic peptides to target those host-cell receptors in extremely susceptible individuals. More research is needed to map SARS-CoV-2 cell entry pathways in order to identify potential viral inhibitors. © 2021 by the authors. Licensee MDPI, Basel, Switzerland.

Bhattacharya, T., S. P. Maishu, R. Akter, M. H. Rahman, M. F. Akhtar, A. Saleem, M. Bin-Jumah, M. Kamel, M. A. Abdel-Latif, and M. M. Abdel-Daim, "A review on natural sources derived protein nanoparticles as anticancer agents", Current Topics in Medicinal Chemistry, vol. 21, issue 12, pp. 1014 - 1026, 2021. AbstractWebsite
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