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Hassan, G. S., H. H. Georgey, N. A. Ibrahim, and S. S. Zakib, "6- Synthesis of novel substituted quinazoline and quinazolin-4(3H)-one derivatives of expected antitumor activity", Der Pharm. Chem. , vol. 7, issue 7, pp. 106-119, 2015. der_pharma_chemica.pdf
El-Meliegy, A., D. Rabah, K. Al-Mitwalli, T. Mostafa, T. Hussein, M. Isterbadi, Y. Lei, and S. Gurbuz, "A 6 month, prospective, observational study of PDE5 inhibitor treatment persistence and adherence in middle Eastern and north African men with erectile dysfunction", CMRO, vol. 29, issue 6, pp. 707-717, 2013.
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Nassar, Y. S., M. Magdy, L. Hamed, and T. E. Gohary, "A 5-year registry of mechanically ventilated patients comprising epidemiology, initial settings, and clinical outcome", Egyptian Journal of Chest Diseases and Tuberculosis, vol. 67, issue 2018, pp. 250-263, 2018. mena_paper.pdf
Srinivas, U. S., J. Dyczkowski, T. Beißbarth, J. Gaedcke, W. Y. Mansour, K. Borgmann, and M. Dobbelstein, "5-Fluorouracil sensitizes colorectal tumor cells towards double stranded DNA breaks by interfering with homologous recombination repair.", Oncotarget, vol. 6, issue 14, pp. 12574-86, 2015 May 20. Abstractsrinivas-2015.pdf

Malignant tumors of the rectum are treated by neoadjuvant radiochemotherapy. This involves a combination of 5-fluorouracil (5-FU) and double stranded DNA-break (DSB)-inducing radiotherapy. Here we explored how 5-FU cooperates with DSB-induction to achieve sustainable DNA damage in colorectal cancer (CRC) cells. After DSB induction by neocarzinostatin, phosphorylated histone 2AX (γ-H2AX) rapidly accumulated but then largely vanished within a few hours. In contrast, when CRC cells were pre-treated with 5-FU, gammaH2AX remained for at least 24 hours. GFP-reporter assays revealed that 5-FU decreases the efficiency of homologous recombination (HR) repair. However, 5-FU did not prevent the initial steps of HR repair, such as the accumulation of RPA and Rad51 at nuclear foci. Thus, we propose that 5-FU interferes with the continuation of HR repair, e. g. the synthesis of new DNA strands. Two key mediators of HR, Rad51 and BRCA2, were found upregulated in CRC biopsies as compared to normal mucosa. Inhibition of HR by targeting Rad51 enhanced DNA damage upon DSB-inducing treatment, outlining an alternative way of enhancing therapeutic efficacy. Taken together, our results strongly suggest that interfering with HR represents a key mechanism to enhance the efficacy when treating CRC with DNA-damaging therapy.

Srinivas, U. S., J. Dyczkowski, T. Beißbarth, J. Gaedcke, W. Y. Mansour, K. Borgmann, and M. Dobbelstein, "5-Fluorouracil sensitizes colorectal tumor cells towards double stranded DNA breaks by interfering with homologous recombination repair.", Oncotarget, vol. 6, issue 14, pp. 12574-86, 2015 May 20. Abstract

Malignant tumors of the rectum are treated by neoadjuvant radiochemotherapy. This involves a combination of 5-fluorouracil (5-FU) and double stranded DNA-break (DSB)-inducing radiotherapy. Here we explored how 5-FU cooperates with DSB-induction to achieve sustainable DNA damage in colorectal cancer (CRC) cells. After DSB induction by neocarzinostatin, phosphorylated histone 2AX (γ-H2AX) rapidly accumulated but then largely vanished within a few hours. In contrast, when CRC cells were pre-treated with 5-FU, gammaH2AX remained for at least 24 hours. GFP-reporter assays revealed that 5-FU decreases the efficiency of homologous recombination (HR) repair. However, 5-FU did not prevent the initial steps of HR repair, such as the accumulation of RPA and Rad51 at nuclear foci. Thus, we propose that 5-FU interferes with the continuation of HR repair, e. g. the synthesis of new DNA strands. Two key mediators of HR, Rad51 and BRCA2, were found upregulated in CRC biopsies as compared to normal mucosa. Inhibition of HR by targeting Rad51 enhanced DNA damage upon DSB-inducing treatment, outlining an alternative way of enhancing therapeutic efficacy. Taken together, our results strongly suggest that interfering with HR represents a key mechanism to enhance the efficacy when treating CRC with DNA-damaging therapy.

Youssif, B. G. M., A. M. Mohamed, E. E. A. Osman, O. F. Abou-Ghadir, D. H. Elnaggar, M. H. Abdelrahman, L. Treamblu, and H. A. M. Gomaa, 5-Chlorobenzofuran-2-carboxamides: From allosteric CB1 modulators to potential apoptotic antitumor agents, , vol. 177, pp. 1 - 11, 2019. AbstractWebsite

Cannabinoids as THC and the CB1 allosteric modulator CBD were reported to have antiproliferative activities with no reports for other CB1 allosteric modulators as the 5-chloroindole-2-carboxamide derivatives and their furan congeners. Based on the antiproliferative activity of two 5-chlorobenzofuran-2-carboxamide allosteric CB1 modulators, a series of novel derivatives was designed and synthesized. The synthesized compounds were tested in a cell viability assay using human mammary gland epithelial cell line (MCF-10A) where all the compounds exhibited no cytotoxic effects and more than 85% cell viability at a concentration of 50 μM. Some derivatives showed good antiproliferative activities against tumor cells as compounds 8, 15, 21 and 22. The most active compound 15 showed equipotent activity to doxorubicin. Compounds 7, 9, 15, 16, 21 and 22 increased the level of active caspase 3 by 4–8 folds, compared to the control cells in MCF-7 cell line and doxorubicin as a reference drug. Compounds 15 and 21, the most activecaspase-3 inducers, increase the levels of caspase 8 and 9 indicating activation of both intrinsic and extrinsic pathways and showed potent induction of Bax, down-regulation of Bcl-2 protein levels and over-expression of Cytochrome C levels in MCF-7 cell lines. Compound 15 exhibited cell cycle arrest at the Pre-G1 and G2/M phases in the cell cycle analysis of MCF-7 cell line. The drug Likeness profile of the synthesized compounds showed that all the compounds were predicted to have high oral absorption complying with different pharmacokinetics filters.

Gomha, S. M., M. M. Edrees, Z. A. Muhammad, and A. A. M. El-Reedy, "5-(Thiophen-2-yl)-1,3,4-thiadiazole derivatives: synthesis, molecular docking and in vitro cytotoxicity evaluation as potential anticancer agents", Drug Design, Development and Therapy, 2018.
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Mens, T., and G. H. Galal, "4th workshop on object-oriented architectural evolution", Object-{Oriented} {Technology}: Springer, pp. 150–164, 2002. Abstract
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Mens, T., and G. H. Galal, "4th workshop on object-oriented architectural evolution", European Conference on Object-Oriented Programming: Springer, Berlin, Heidelberg, pp. 150–164, 2001. Abstract
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Safina, E. - S. M. S. Gheith, S. a. mouas, and O. Z. El-Badry, "497Original Research ArticlePlant Cell Biotechnology and Molecular Biology 22(71&72):497-505; 2021ISSN: 0972-2025RESPONSE OF THEE WHEAT VARIETIES TO NITROGENLEVELS, SEEDING RATES AND THEIR COMBINATION: 3-STRAW YIELD AND ITS COMPONENTS", 497Original Research ArticlePlant Cell Biotechnology and Molecular Biology , vol. 22(71&72), pp. 467-505, 2021. safina_2021.pdf
Ragab, Y., Y. Emad, T. Gheita, O. Moawayh, A. Abou-Zeid, and J. J. Rasker, "474 DIFFERENTIATION OF OSTEOPOROTIC AND NEOPLASTIC VERTEBRAL FRACTURES BY OPPOSED-PHASED IMAGING (CHEMICAL SHIFT MR IMAGING)", European Journal of Pain, vol. 13: No longer published by Elsevier, pp. S141, 2009. Abstract
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Naguib, M. L., I. Schrijver, P. Gardner, L. M. Piquet, S. S. Doss, M. A. A. Zekry, M. Aziz, and S. Z. Nasré, "472 Incidence of Cystic Fibrosis in high-risk Egyptian children and CFTR mutation analysis", Journal of Cystic Fibrosis, vol. 5: Elsevier, pp. S103, 2006. Abstract
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Gawad, W., and I. Gouda, "400 POSTER Sentinel lymphatic mapping in rectal cancer", European Journal of Surgical Oncology (EJSO), vol. 32: WB Saunders, pp. S119, 2006. Abstract
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Galal, N., W. El-Beialy, Y. Deyama, Y. Yoshimura, KanchuTei, K. Suzuki, and Y. Totsuka, "4. Up-regulation of the G3PDH ‘housekeeping’ gene by estrogen", Molecular Medicine Reports , vol. 3, pp. 111-113, 2010.
Zayed, E. M., and A. S. Ghozlan, "4-Arylazo-3,5-diaminoisoxazole: Synthesis and some chemical reactions", Z. NATURFORSCH., vol. 40, issue 12, pp. 1727 - 1730, 1985. AbstractWebsite
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Ismael, M., N. M. Gharib, and S. M. Adel, "4- Kinematic and Electromyographic Analysis of Knee Motion During Rising from A Chair in Stroke Patients.", Bull. Fac. Ph. Th. Cairo Univ.,: Vol. 13, No. (2) Jul. 2008, vol. 13, issue 2, 2008.
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Abdelmoniem, A. M., S. A. S. Ghozlan, D. M. Abdelmoniem, A. H. M. Elwahy, and I. A. Abdelhamid, "3‐Amino‐5‐cyanomethylpyrazole‐4‐carbonitrile: Versatile Reagent for Novel Bis (pyrazolo [1, 5‐a] pyridine) Derivatives via a Multicomponent Reaction", Journal of Heterocyclic Chemistry, vol. 55, issue 12, pp. 2792-2798, 2018. Abstract
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Abdelmoniem, A. M., S. A. S. Ghozlan, D. M. Abdelmoniem, A. H. M. Elwahy, and I. A. Abdelhamid, "3‐Amino‐5‐cyanomethylpyrazole‐4‐carbonitrile: Versatile Reagent for Novel Bis (pyrazolo [1, 5‐a] pyridine) Derivatives via a Multicomponent Reaction", Journal of Heterocyclic Chemistry, 2018. Abstract
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Abdelmoniem, A. M., S. A. S. Ghozlan, D. M. Abdelmoniem, A. H. M. Elwahy, and I. A. Abdelhamid, "3‐Amino‐5‐cyanomethylpyrazole‐4‐carbonitrile: Versatile Reagent for Novel Bis (pyrazolo [1, 5‐a] pyridine) Derivatives via a Multicomponent Reaction", Journal of Heterocyclic Chemistry, 2018. Abstract
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Senousy, Z., M. M. Abdelsamea, M. M. Mohamed, and M. M. Gaber, "3E-Net: Entropy-Based Elastic Ensemble of Deep Convolutional Neural Networks for Grading of Invasive Breast Carcinoma Histopathological Microscopic Images.", Entropy (Basel, Switzerland), vol. 23, issue 5, 2021. Abstract

Automated grading systems using deep convolution neural networks (DCNNs) have proven their capability and potential to distinguish between different breast cancer grades using digitized histopathological images. In digital breast pathology, it is vital to measure how confident a DCNN is in grading using a machine-confidence metric, especially with the presence of major computer vision challenging problems such as the high visual variability of the images. Such a quantitative metric can be employed not only to improve the robustness of automated systems, but also to assist medical professionals in identifying complex cases. In this paper, we propose Entropy-based Elastic Ensemble of DCNN models (3E-Net) for grading invasive breast carcinoma microscopy images which provides an initial stage of explainability (using an uncertainty-aware mechanism adopting entropy). Our proposed model has been designed in a way to (1) exclude images that are less sensitive and highly uncertain to our ensemble model and (2) dynamically grade the non-excluded images using the certain models in the ensemble architecture. We evaluated two variations of 3E-Net on an invasive breast carcinoma dataset and we achieved grading accuracy of 96.15% and 99.50%.

Maged, A. M., A. E. - M. Ramzy, M. Aboulghar, H. ElShenoufy, S. H. Gad Allah, A. H. Wahba, A. A. Y. ElKateb, and N. Hwedi, "3D ultrasound assessment of endometrial junctional zone anatomy as a predictor of the outcome of ICSI cycles.", European journal of obstetrics, gynecology, and reproductive biology, vol. 212, pp. 160-165, 2017 May. Abstract

OBJECTIVE: To study the relation between junctional zone thickness (JZ) and success of implantation in IVF/ICSI cycles.

STUDY DESIGN: A prospective study included 100 infertility patients undergoing ICSI. The long protocol was used in all patients. JZ was measured using 3D ultrasound, in the coronal section, at three places, on two occasions. First measurement was done before HMG was started (i.e. when down regulation was achieved). Second measurement was done on the day of ovum pick up (OPU). Follow up after treatment was done to determine the rate of implantation.

RESULTS: There was a highly significant difference between pregnant and non pregnant treated women regarding the measurement of JZ at the day of OPU at all sites named fundal (0.27±0.1 vs. 0.38±0.14), anterior (0.28±0.07 vs. 0.36±0.09), posterior (0.32±0.1 vs. 0.37±0.09) and average (0.29±0.08 vs. 0.37±0.09) respectively. The cut off value, sensitivity and specificity of measurement of JZ at fundus were (≤0.31,90% and 66.7%), at anterior wall were (≤0.35,90% and 60%), at posterior wall (≤0.25, 50% and 93.3%) and average were (≤0.32,70% and 70%) respectively.

CONCLUSION: The thinner the junctional zone at day of OPU, the higher the implantation rate and the difference between JZ measured at the day of down regulation and the day of OPU is a predictor of the outcome of ICSI cycles.

Salman, Y. M., A. M. Badawi, M. S. Gadallah, and S. M. Alian, "3D segmentation of complex brain tumor as a component of pre-surgical planning", In Proceedings of 4th international conference on electrical Engineering: Egy. Military Tech. College, pp. 207–214, 2004. Abstract
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Ahmed, S. S., M. AlHeib, Y. Gunzburger, and V. Renaud, "3D numerical simulation of the goal due to large-scale longwall mining", GeoMEast 2017, Egypt, July , 2017.
Roujol, S., T. A. Basha, M. Akçakaya, M. Foppa, R. H. Chan, K. V. Kissinger, B. Goddu, S. Berg, W. J. Manning, and R. Nezafat, "3D late gadolinium enhancement in a single prolonged breath‐hold using supplemental oxygenation and hyperventilation", Magnetic resonance in medicine, vol. 72, issue 3, pp. 850-857, 2014. Abstract
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Roujol, S., T. A. Basha, M. Akçakaya, M. Foppa, R. H. Chan, K. V. Kissinger, B. Goddu, S. Berg, W. J. Manning, and R. Nezafat, "3D late gadolinium enhancement in a single prolonged breath-hold using supplemental oxygenation and hyperventilation", Magnetic resonance in medicine, vol. 72, no. 3, pp. 850–857, 2014. Abstract
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