Ismail, S. M., M. A. Abd-Elmawla, E. Maha, and H. A. Darwish, "The role of LncRNAs and CircRNAs in osteoporosis: a focus on osteogenesis and osteoclastogenesis signaling pathways", Future Journal of Pharmaceutical Sciences, vol. 10, issue 1, pp. 64, 2024.
Moustafa, H. A. M., W. A. El-Dakroury, A. Ashraf, A. I. Abulsoud, S. S. Elshaer, N. M. Abdelmaksoud, N. I. Rizk, S. A. S. Mageed, M. B. Zaki, R. M. Mansour, et al., "SNP's use as a potential chemotoxicity stratification tool in breast cancer: from bench to clinic.", Functional & integrative genomics, vol. 25, issue 1, pp. 93, 2025. Abstract

Breast cancer (BC) remains one of the most prevalent malignancies affecting women worldwide, necessitating ongoing research to improve treatment outcomes and minimize adverse effects associated with chemotherapy. This article explores the role of genetic variations, particularly single nucleotide polymorphisms (SNPs), in influencing the efficacy and toxicity of chemotherapeutic agents used in BC treatment. It highlights the impact of polymorphisms in drug metabolism and transport genes, such as UDP-glucuronosyltransferase 1A1 (UGT1A1), carbonyl reductase 1 (CBR1), and ATP-binding cassette multidrug transporter (ABCB1) on the risk of adverse effects, including cardiotoxicity and hematological toxicities. By identifying specific SNPs associated with drug response and toxicity, this research underscores the potential for personalized medicine approaches to optimize treatment regimens, enhance therapeutic efficacy, and minimize side effects in BC patients. The findings advocate for the integration of genetic screening in clinical practice to improve patient outcomes and tailor chemotherapy based on individual genetic profiles.

Doghish, A. S., A. Mahmoud, M. A. Abd-Elmawla, M. B. Zaki, N. M. Aborehab, A. Hatawsh, A. F. Radwan, G. A. Sayed, R. Moussa, M. A. Abdel-Reheim, et al., "Innovative perspectives on glioblastoma: the emerging role of long non-coding RNAs.", Functional & integrative genomics, vol. 25, issue 1, pp. 43, 2025. Abstract

Glioblastoma (GBM) is a highly aggressive and treatment-resistant brain tumor. Recent advancements have highlighted the crucial role of long noncoding RNAs (lncRNAs) in GBM's molecular biology. Unlike protein-coding RNAs, lncRNAs regulate gene expression through transcription, post-transcriptional modifications, and chromatin remodeling. Some lncRNAs, like HOTAIR, CCAT2, CRNDE, and MALAT1, promote GBM development by affecting tumor suppressors and various signaling pathways like PI3K/Akt, mTOR, EGFR, NF-κB, and Wnt/β-catenin. Conversely, certain lncRNAs such as TUG1, MEG3, and GAS8-AS1 act as tumor suppressors and are associated with better prognosis. The study presented in the manuscript aims to explore the involvement of lncRNAs in GBM, focusing on their roles in tumor progression, proliferation, invasion, and potential implications for early detection and immunotherapy. The research seeks to elucidate the mechanisms by which specific lncRNAs influence GBM characteristics and highlight their potential as therapeutic targets or biomarkers in managing this aggressive form of brain cancer.

Hamdy, N. M., M. B. Zaki, N. M. Abdelmaksoud, S. S. Elshaer, M. A. Abd-Elmawla, N. I. Rizk, D. Fathi, A. S. Doghish, and A. I. Abulsoud, "Comprehensive insights and In silico analysis into the emerging role of LincRNAs in lung diseases pathogenesis; a step toward ncRNA precision.", Functional & integrative genomics, vol. 25, issue 1, pp. 34, 2025. Abstract

Long non-coding RNAs (lncRNAs) have emerged as essential regulators of gene expression, significantly influencing various biological processes. Approximately half of all lncRNAs are classified as long intergenic non-coding RNAs (lincRNAs), which are situated among coding genes. Recent studies have documented the role of lincRNAs in the pathogenesis of lung diseases, including lung cancer, pulmonary fibrosis, and pulmonary arterial hypertension. These lincRNAs can modulate gene expression through various mechanisms, including epigenetic modifications, transcriptional regulation, and post-transcriptional regulation. By functioning as competing endogenous RNAs (ceRNAs), lincRNAs can affect the activity of microRNAs (miRNAs) and their corresponding target genes. This review delves into the intricate mechanisms by which lincRNAs contribute to the development and progression of various lung diseases. Furthermore, it discusses the potential of lincRNAs as therapeutic targets.

Doghish, A. S., S. A. S. Mageed, M. B. Zaki, M. A. Abd-Elmawla, G. A. Sayed, A. Hatawsh, N. M. Aborehab, R. Moussa, O. A. Mohammed, M. A. Abdel-Reheim, et al., "Role of long non-coding RNAs and natural products in prostate cancer: insights into key signaling pathways.", Functional & integrative genomics, vol. 25, issue 1, pp. 16, 2025. Abstract

Prostate cancer (PC) ranks among the most prevalent cancers in males. Recent studies have highlighted intricate connections between long non-coding RNAs (lncRNAs), natural products, and cellular signaling in PC development. LncRNAs, which are RNA transcripts without protein-coding function, influence cell growth, programmed cell death, metastasis, and resistance to treatments through pathways like PI3K/AKT, WNT/β-catenin, and androgen receptor signaling. Certain lncRNAs, including HOTAIR and PCA3, are associated with PC progression, with potential as diagnostic markers. Natural compounds, such as curcumin and resveratrol, demonstrate anticancer effects by targeting these pathways, reducing tumor growth, and modulating lncRNA expression. For instance, curcumin suppresses HOTAIR levels, hindering PC cell proliferation and invasion. The interaction between lncRNAs and natural compounds may open new avenues for therapy, as these substances can simultaneously impact multiple signaling pathways. These complex interactions offer promising directions for developing innovative PC treatments, enhancing diagnostics, and identifying new biomarkers for improved prevention and targeted therapy. This review aims to map the multifaceted relationship among natural products, lncRNAs, and signaling pathways in PC pathogenesis, focusing on key pathways such as AR, PI3K/AKT/mTOR, WNT/β-catenin, and MAPK, which are crucial in PC progression and therapy resistance. Regulation of these pathways by natural products and lncRNAs could lead to new insights into biomarker identification, preventive measures, and targeted PC therapies.

Abd-Elmawla, M. A., M. Zidan, Y. A. Elsabagh, N. Elfar, and A. F. Radwan, "Dissecting the role of SPRY4-IT1 and TUG1 in modulating miR-425/TGF-β/ Smad signaling in mediating renal fibrosis and inflammation in lupus nephritis: Novel biomarkers and therapeutic targets.", International immunopharmacology, vol. 162, pp. 115132, 2025. Abstract

Lupus nephritis (LN), the severe complication of systemic lupus erythematosus (SLE), is driven by inflammation and fibrosis, often leading to chronic kidney diseases. The current study aimed to elucidate the roles of long non-coding RNAs (lncRNAs) SPRY4-IT1 and TUG1, and miR-425 in modulating the TGF-β/Smad signaling pathway and to assess their potential as biomarkers and therapeutic targets. A case-control study was conducted involving 100 participants, including LN patients (n = 35), SLE patients without LN (n = 35), and healthy controls (n = 30). Serum expression levels of SPRY4-IT1, TUG1, miR-425 and Smads were measured using qRT-PCR, while TGF-β, fibronectin,TNF-α and PIIINP were analyzed via ELISA. The results showed a significant upregulation of SPRY4-IT1 and TUG1 and a downregulation of miR-425 in LN patients compared to controls (p < 0.01). These ncRNAs demonstrated strong correlations with TGF-β, Smad2/3, and other fibrotic markers, while inversely correlating with miR-425. ROC curve analysis identified SPRY4-IT1 as the most robust diagnostic marker (AUC = 0.85, sensitivity = 82 %, specificity = 70 %). Pathway analyses confirmed their involvement in inflammatory and fibrotic processes. These findings suggest that SPRY4-IT1 and TUG1 contribute to LN pathogenesis through the miR-425/TGF-β/Smad axis, underscoring their potential as novel diagnostic and therapeutic targets. Further research in larger cohorts is warranted to validate these findings and explore clinical applications.

Elimam, H., A. F. Radwan, N. H. El Said, N. Elfar, M. A. Abd-Elmawla, N. M. Aborehab, K. Nassar, O. A. Mohammed, and A. S. Doghish, "Long non-coding RNAs and signaling networks in non-small cell lung cancer: mechanistic insights into tumor pathogenesis.", Cancer gene therapy, 2025. Abstract

Non-small cell lung cancer (NSCLC) remains a leading cause of cancer-related mortality globally, largely attributable to its molecular heterogeneity and resistance to current therapeutic modalities. Dysregulation of key intracellular signaling pathways, including EGFR, PI3K/AKT/mTOR, JAK/STAT, and p53, plays a central role in NSCLC pathogenesis, driving tumor initiation, progression, metastasis, and therapeutic resistance. Increasing evidence highlights long non-coding RNAs (lncRNAs) as critical regulatory molecules within these signaling networks. Aberrant lncRNA expression contributes to oncogenic signaling, modulates the tumor microenvironment, and promotes hallmark cancer traits such as uncontrolled proliferation, evasion of apoptosis, metastasis, and chemoresistance. This review synthesizes contemporary findings on the molecular mechanisms by which lncRNAs influence major oncogenic cascades in NSCLC. Both oncogenic and tumor-suppressive lncRNAs are examined, with an emphasis on their functional interplay with signaling mediators and their contributions to tumor biology. Moreover, the clinical relevance of lncRNAs as diagnostic and prognostic biomarkers is explored, alongside emerging therapeutic strategies designed to target lncRNA-mediated dysregulation. Approaches such as antisense oligonucleotides, RNA interference, and CRISPR/Cas9-based gene modulation offer promising avenues for therapeutic intervention. This review provides a comprehensive framework for understanding the roles of lncRNAs in NSCLC and supports the advancement of lncRNA-targeted precision medicine strategies in lung cancer management.

HAMAD, R. A. B. A. B. S., G. A. Sayed, M. A. Abd-Elmawla, S. A. S. Mageed, A. I. Abulsoud, M. B. Zaki, O. A. Mohammed, S. S. Elshaere, A. E. Elesawy, S. Y. Elkhawaga, et al., "Targeting miRNAs in renal cell carcinoma: emerging therapeutic strategies.", International journal of clinical oncology, vol. 30, issue 10, pp. 1925-1945, 2025. Abstract

About one-third of renal cell carcinoma (RCC) patients present with metastatic disease upon diagnosis because of the retroperitoneal location of the kidneys, which causes many tumors to stay asymptomatic. Besides, shortly after 5 years following successful curative surgery, nearly 30% of individuals develop distant cancer metastases and recurrences. This is mostly attributable to the complex and diverse characteristics of the tumor microenvironment. Although targeted treatments and immunotherapies can extend the survival of patients, they are linked to the swift emergence of resistance, constraining the therapeutic alternatives for RCC patients and drawing attention to the critical requirement for improved targeted treatments. Along the same vein, there is an urgent demand for novel biomarkers capable of detecting early RCC with significant sensitivity and specificity. Additionally, prognostic indicators are required for the stratification of RCC patients. MicroRNAs (miRNAs) are crucial regulators of mRNA and subsequent protein production in both healthy and malignant tissues. The malignant pathophysiology of RCC has been associated with miRNA dysregulation, which impacts numerous cellular processes and has been found to increase the likelihood of proliferative and invasive processes, promote angiogenesis, alter cell cycle dynamics, evade cell death, facilitate metastasis, and make cancer cells less responsive to certain treatments. Therefore, in this review, we will go over the latest findings regarding the functions of oncogenic and tumor suppressor miRNAs in RCC, how they could be used as diagnostic and prognostic indicators for RCC, and the role they play in the development of RCC and its resistance to cancer-fighting therapies.

Ayeldeen, G., B. M. Badr, A. A. Awaji, D. A. Gaber, D. A. Elelwany, A. K. Al Abdulqader, O. G. Shaker, and M. A. Abd-Elmawla, "Unraveling the Role of THRIL/miR-137 in Fine-Tuning the Immunological Transcriptional Loop STAT4/STAT6/GATA3 in Multiple Sclerosis: Implications on Neurological Complications and Disease Subtypes.", ACS chemical neuroscience, vol. 16, issue 13, pp. 2513-2527, 2025. Abstract

Multiple sclerosis (MS) is an autoimmune disease associated with neurological impairments. The study aimed to evaluate the role of the noncoding RNAs THRIL/miR-137 in MS pathogenesis via studying their effect on the immunological transcriptional loop STAT4/STAT6/GATA3, and their association with MS-related neurological impairments and disease subtypes. Overall, 148 participants were included: 74 MS patients and 74 matched healthy controls. Gene expressions of THRIL, miR-137, STAT4, STAT6, and GATA3 were assessed using reverse transcription quantitative polymerase chain reaction (RT-qPCR). The potential protein interaction networks of these genes were predicted using bioinformatic analysis. Compared with the control group, THRIL, STAT4, and GATA3 were upregulated, whereas miR-137 and STAT6 were downregulated in MS patients. Furthermore, THRIL, STAT4, and GATA3 were upregulated, while miR-137 and STAT6 were downregulated in MS patients with Expanded Disability Status Scale (EDSS) ≥ 3.5, relative to patients with EDSS < 3.5. Similarly, THRIL, STAT4, and GATA3 were upregulated, while miR-137 and STAT6 were downregulated in Secondary Progressive MS (SPMS) patients relative to Relapsing-Remitting MS (RRMS). Notably, receiver operating characteristic (ROC) curve analysis revealed that THRIL, miR-137, and STAT4/STAT6/GATA3 can be used in differentiating between MS patients with neurological impairments as well as MS subtypes. Significantly, logistic analysis revealed that THRIL, miR-137, and STAT4/STAT6/GATA3 could act as predictors to diagnose MS and the associated neurological impairments. In conclusion, the study demonstrated for the first time the role of THRIL/miR-137 in regulating the immunological transcriptional loop STAT4/STAT6/GATA3, which may contribute to neurological complications. These findings provide insights into MS pathogenesis and highlight the potential of these genes as biomarkers or therapeutic targets.

Attallah, K. A., A. M. El-Dessouki, M. A. Abd-Elmawla, H. R. ghaiad, F. Abo-Elghiet, A. M. Mustafa, R. A. El-Shiekh, and H. Elosaily, "The therapeutic potential of naturally occurring 6-shogaol: an updated comprehensive review.", Inflammopharmacology, 2025. Abstract

Shogaol, a significant bioactive constituent of ginger, is present in several forms, including 4-, 6-, 8-, 10-, and 12-shogaol, with 6-shogaol identified as the most potent among them. Notably, 6-shogaol can be metabolized into 6-paradol, a compound that lacks pungency but retains biological activity. The primary focus of this review is to trace the diverse pharmacological effects of 6-shogaol, such as its anti-inflammatory, cardioprotective, neuroprotective, antioxidant, and anticancer properties, and to document the molecular mechanisms underlying these actions. 6-Shogaol's broad spectrum of benefits makes it valuable in the health, food, and beverage industries, where its unique taste, high biocompatibility, and ability to alleviate or prevent various health issues are particularly advantageous. Its multiple mechanisms of action, including the modulation of oxidative stress and inflammation, contribute to its reputation as a promising natural compound. By highlighting the therapeutic potential of 6-shogaol, this review aims to provide a scientific foundation for its future development, clinical application, and incorporation into functional foods or pharmaceuticals, ultimately supporting its role as a versatile agent in promoting human health.

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