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2023
Pagnossa, J. P., S. O. de Rodrigues, G. F. de Oliveira, M. Adnan, M. S. Aljaid, I. B. de Assis, A. S. G. Lima, M. Patel, H. A. Ogaly, and G. E. - S. Batiha, "COVID-19 in a Pre-Omicron Era: A Cross-Sectional Immuno-Epidemical and Genomic Evaluation", Vaccines, vol. 11, issue 2: MDPI, pp. 272, 2023. Abstract
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Roczkowsky, A., D. Limonta, J. P. Fernandes, W. G. Branton, M. Clarke, B. Hlavay, R. S. Noyce, J. T. Joseph, N. S. Ogando, S. K. Das, et al., "COVID-19 induces neuroinflammation and suppresses peroxisomes in the brain", Ann Neurol, 2023. AbstractWebsite

Peroxisome injury occurs in the central nervous system (CNS) during multiple virus infections that result in neurological disabilities. We investigated host neuroimmune responses and peroxisome biogenesis factors during SARS-CoV-2 infection using a multiplatform strategy.|Brain tissues from COVID-19 (n=12) and other disease control (ODC) (n=12) patients, as well as primary human neural cells and Syrian hamsters, infected with a clinical variant of SARS-CoV-2, were investigated by ddPCR, RT-qPCR and immunodetection methods.|SARS-CoV-2 RNA was detected in the CNS of four patients with COVID-19 with viral protein (NSP3 and spike) immunodetection in the brainstem. Olfactory bulb, brainstem, and cerebrum from patients with COVID-19 showed induction of pro-inflammatory transcripts (IL8, IL18, CXCL10, NOD2) and cytokines (GM-CSF and IL-18) compared to CNS tissues from ODC patients (p<0.05). Peroxisome biogenesis factor transcripts (PEX3, PEX5L, PEX11β and PEX14) and proteins (PEX3, PEX14, PMP70) were suppressed in the CNS of COVID-19 patients compared to ODCs (p<0.05). SARS-CoV-2 infection of hamsters revealed viral RNA detection in the olfactory bulb at days 4 and 7 post-infection while inflammatory gene expression was upregulated in the cerebrum of infected animals by day 14 post-infection (p<0.05). Pex3 transcript levels together with catalase and PMP70 immunoreactivity were suppressed in the cerebrum of SARS-CoV-2 infected animals (p<0.05).|COVID-19 induced sustained neuroinflammatory responses with peroxisome biogenesis factor suppression despite limited brainstem SARS-CoV-2 neurotropism in humans. These observations offer insights into developing biomarkers and therapies, while also implicating persistent peroxisome dysfunction as a contributor to the neurological post-acute sequelae of COVID-19. This article is protected by copyright. All rights reserved.

Mahmoud, Y., A. Hathout, R. A. Amen, S. Desouky, R. M. Shady, and H. M. Fahmy, "COVID-19 omicron variant: variation from other variants, immune response, and vaccination against this rapidly spreading pandemic. ", Reviews and Research in Medical Microbiology, vol. 10, pp. 1097, 2023.
Abdulnaby, N. K., S. M. Gamal, A. Alkemary, M. Abdo, I. R. E. N. E. M. SABRY, M. I. Belita, and S. S. Mohamed, "COVID-19 outcomes in patients with and without autoimmune rheumatic diseases: A multicenter comparative study", International journal of rheumatic diseases, vol. 26, issue 5, pp. 870-877, 2023. Abstract

Background and objective: People with rheumatic diseases are particularly concerned with the coronavirus disease 2019 (COVID-19) pandemic. Our work aimed to study the impact of pre-existing autoimmune rheumatic disease (AIRD) and its immunosuppressive drugs on COVID-19 severity and outcome.

Patients and methods: This is a multicenter case-control study performed between September 2020 and February 2021 on 130 adults with COVID-19, including 66 patients with AIRD and 64 without AIRD, who served as a control group.

Results: Regarding COVID-19 clinical manifestations; diarrhea, fatigue, and headache were found with significantly higher frequency in the AIRD group while a higher frequency of cough was found in the control group. Comparing COVID-19 complications, only septic shock was significantly higher in the AIRD group (P = 0.013). Both groups were treated with similar COVID-19 drugs except for tocilizumab and anticoagulants, which were statistically significantly more frequently used in the control group (P < 0.001 for both). No statistically significant difference was found between the groups in the outcome or severity of COVID-19. There was no impact of previous immunosuppressive drugs before COVID-19 on the severity of the disease except for a longer duration of recovery in patients on steroids (P < 0.001). Patients with hypertension had severe COVID-19 compared with those without (odds ratio 2.8, 95% confidence interval 1.2-6.9; P = 0.020).

Conclusion: AIRD may not affect COVID-19 severity and outcome. Similarly, immunosuppressive medications had no effect; except that patients on systemic steroids had longer duration for recovery. Comorbid conditions, such as hypertension, may be associated with more severe COVID-19 disease course.

MR, S., H. N, A. E. F. SAM, S. AEM, and H. AM, "COVID-19 prevention and rehabilitation related knowledge and practices among Egyptian post-COVID-19 patients.", PLoS One, vol. 18, issue 10, pp. e0292247, 2023.
Hoff, L. S., N. Ravichandran, S. K. Shinjo, J. Day, P. Sen, J. G. Junior, J. B. Lilleker, M. Joshi, V. Agarwal, S. Kardes, et al., "COVID-19 severity and vaccine breakthrough infections in IIM, other systemic autoimmune and inflammatory diseases, and healthy controls: a multicenter cross-sectional study from the COVID-19 Vaccination in Autoimmune Diseases (COVAD) survey.", Rheumatology international, vol. 43, issue 1, pp. 47-58, 2023. Abstract

OBJECTIVES: We aimed to compare the spectrum and severity of COVID-19 and vaccine breakthrough infections (BIs) among patients with IIMs, other systemic autoimmune and inflammatory diseases (SAIDs), and healthy controls (HCs).

METHODS: This is a cross-sectional study with data from the COVAD study, a self-reported online global survey that collected demographics, COVID-19 history, and vaccination details from April to September 2021. Adult patients with at least one COVID-19 vaccine dose were included. BIs were defined as infections occurring > 2 weeks after any dose of vaccine. Characteristics associated with BI were analyzed with a multivariate regression analysis.

RESULTS: Among 10,900 respondents [42 (30-55) years, 74%-females, 45%-Caucasians] HCs were (47%), SAIDs (42%) and IIMs (11%). Patients with IIMs reported fewer COVID-19 cases before vaccination (6.2%-IIM vs 10.5%-SAIDs vs 14.6%-HC; OR = 0.6, 95% CI 0.4-0.8, and OR = 0.3, 95% CI 0.2-0.5, respectively). BIs were uncommon (1.4%-IIM; 1.9%-SAIDs; 3.2%-HC) and occurred in 17 IIM patients, 13 of whom were on immunosuppressants, and 3(18%) required hospitalization. All-cause hospitalization was higher in patients with IIM compared to HCs [23 (30%) vs 59 (8%), OR = 2.5, 95% CI 1.2-5.1 before vaccination, and 3 (18%) vs 9 (5%), OR = 2.6, 95% CI 1.3-5.3 in BI]. In a multivariate regression analysis, age 30-60 years was associated with a lower odds of BI (OR = 0.7, 95% CI 0.5-1.0), while the use of immunosuppressants had a higher odds of BI (OR = 1.6, 95% CI 1.1-2.7).

CONCLUSIONS: Patients with IIMs reported fewer COVID-19 cases than HCs and other SAIDs, but had higher odds of all-cause hospitalization from COVID-19 than HCs. BIs were associated with the use of immunosuppressants and were uncommon in IIMs.

Naveen, R., I. Parodis, M. Joshi, P. Sen, J. Lindblom, V. Agarwal, J. B. Lilleker, A. L. Tan, A. Nune, S. K. Shinjo, et al., "COVID-19 vaccination in autoimmune diseases (COVAD) study: vaccine safety and tolerance in rheumatoid arthritis.", Rheumatology (Oxford, England), vol. 62, issue 7, pp. 2366-2376, 2023. Abstract

OBJECTIVES: The COVID-19 vaccination in autoimmune diseases (COVAD) study aimed to assess short-term COVID-19 vaccination-related adverse events (AEs) in RA patients.

METHODS: An online self-reported questionnaire (March-December 2021) was used to capture data related to COVID-19 vaccination-related AEs in RA, other autoimmune rheumatic diseases (AIRDs) (excluding RA and inflammatory myositis), non-rheumatic autoimmune diseases (nrAIDs) and healthy controls (HCs). Descriptive and multivariable regression analyses were performed.

RESULTS: Of the 9462 complete respondents, 14.2% (n = 1347) had been diagnosed with RA; they had a mean (s.d.) age of 50.7 (13.7) years, 74.2% were women and 49.3% were Caucasian. In total, 76.9% and 4.2% of patients with RA reported minor and major AEs, respectively. Patients with active and inactive RA had similar AE and hospitalization frequencies. Overall, AEs were reported more frequently by BNT162b2 and mRNA-1273 recipients and less frequently by BBV152 recipients compared with the rest. Major AE and hospitalization frequencies were similar across recipients of different vaccines. Patients receiving methotrexate and hydroxychloroquine reported fewer minor AEs than those patients not on them. Compared with HCs and patients with other AIRDs, patients with RA reported similar total AEs, overall minor AEs, and hospitalizations. Compared with nrAIDs, patients with RA reported lower frequencies of overall AEs, minor AEs (both odds ratio [OR] = 0.7; 95% CI: 0.5, 0.9), and injection site pain (OR = 0.6; 95% CI: 0.5, 0.8) with similar major AE and hospitalization frequencies.

CONCLUSION: Despite the differences in AE frequency across different COVID-19 vaccines, all were well tolerated in patients with RA and were comparable to HCs, providing reassurance as to the safety of COVID-19 vaccination.

Shawki, M. A., A. Kamel, S. Gamal, M. M. Abbassi, S. F. Farid, and N. A. Sabry, "COVID-19 vaccine hesitancy in Egypt: a cross-sectional study", The Journal of Infection in Developing Countries, vol. 17, no. 09, pp. 1188–1198, 2023. Abstract
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Andreoli, L., P. Sen, D. Lini, M. N. Vincze, K. Schreiber, V. Agarwal, R. Aggarwal, and L. Gupta, "COVID-19 vaccine safety during the antenatal period in women with idiopathic inflammatory myopathies.", Rheumatology (Oxford, England), vol. 62, issue 6, pp. e175-e179, 2023.
nasser, sherif, Mohamed, Ireny, Marwa, Alkhatib, and sally, "COVID‐19 outcomes in patients with and without autoimmune rheumatic diseases: A multicenter comparative study", International Journal of Rheumatic diseases, vol. 26, issue 5, pp. 870-77, 2023.
Talaat, N. B., A. W. M. Mahmoud, and A. M. A. Hanafy, "Co‑application of salicylic acid and spermine alleviates salt stress toxicity in wheat: growth, nutrient acquisition, osmolytes accumulation, and antioxidant response", Acta Physiologiae Plantarum, vol. 45, issue 1, pp. 1-15, 2023.
Talaat, N. B., A. W. M. Mahmoud, and A. M. A. Hanafy, "Co‑application of salicylic acid and spermine alleviates salt stress toxicity in wheat: growth, nutrient acquisition, osmolytes accumulation, and antioxidant response", Acta Physiologiae Plantarum, vol. 45, issue 1, pp. 1-15, 2023.
Zaki, Y. A., A. A. Abouhussien, A. A. A. Hassan, M. K. Ismail, and B. H. AbdelAleem, "Crack detection and classification of repaired concrete beams by acoustic emission monitoring", Ultrasonics, vol. 134, pp. 107068, 2023.
Rihan, M., and M. M. Salama, "Critical body mass index associated with increased ventral hernia recurrence rate", International Journal of Abdominal Wall and Hernia Surgery, 2023.
Elshaboury, N., E. M. Abdelkader, A. Al-Sakkaf, and T. Zayed, "A Critical Review and Bibliometric Analysis on Applications of Ground Penetrating Radar in Science Based onWeb of Science Database", Eng, vol. 4, pp. 984-1008, 2023.
Knoth, S., N. A. Saleh, M. A. Mahmoud, W. H. Woodall, and V. G. Tercero-Gómez, "A critique of a variety of “memory-based” process monitoring methods", Journal of Quality Technology, vol. 55, issue 1, pp. 18-42, 2023.
Elsadda, H., "Critique voyageuse: l’anti-imperialisme, le genre et les droits", Alternatives Sud, Anticolonialisme(s) : Points de vue du Sud, vol. 30, Paris, Cairn, pp. 184, 2023.
ElSawey, H., E. H. Nour, T. A. R. E. K. R. ELSAYED, R. A. Nemr, H. H. Youssef, M. A. Hamza, and M. Abbas, "Cross Cultivation on Homologous/Heterologous Plant-Based Culture Media Empowers Host-Specific and Real Time In Vitro Signature of Plant Microbiota", Diversity, vol. 15, pp. 1-20, 2023.
ElSawey, H., E. H. Nour, T. A. R. E. K. R. ELSAYED, R. A. Nemr, H. H. Youssef, M. A. Hamza, and M. Abbas, "Cross Cultivation on Homologous/Heterologous Plant-Based Culture Media Empowers Host-Specific and Real Time In Vitro Signature of Plant Microbiota", Diversity, vol. 15, pp. 1-20, 2023.
ElSawey, H., E. H. Nour, T. A. R. E. K. R. ELSAYED, R. A. Nemr, H. H. Youssef, M. A. Hamza, and M. Abbas, "Cross Cultivation on Homologous/Heterologous Plant-Based Culture Media Empowers Host-Specific and Real Time In Vitro Signature of Plant Microbiota", Diversity, vol. 15, pp. 1-20, 2023. diversity-15-00046.pdf
MOHAMED, R. A. N. I. A. R., A. H. Mohammed, and Y. E. T. Farouk1, "Cross Cultural Adaptation, Validity, Reliability and Responsiveness of the Arabic Version of Northwick Park Neck Pain Questionnaire", European Chemical Bulletin, vol. 12, issue 4, pp. 1132-1143, 2023. 29485156eeca4529138ac7ea94a488b9.pdf
Bibars, M., Salah, Eldeib, Elattar, M.A., and I. A. Yassine, "Cross-Modality Deep Transfer Learning: Application to Liver Segmentation in CT and MRI", Lecture Notes in Computer Science, https://doi.org/10.1007/978-3-031-48593-0_7, vol. 14122, pp. 96–110, 2023.
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